Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 AC069544.1-201ENST00000609399 999 ntBASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 MTDHP1-201ENST00000605323 784 ntBASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH19Q8TAB3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 GCSHP5-201ENST00000443090 522 ntBASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 AC073648.6-201ENST00000641589 218 ntBASIC20.08■□□□□ 0.81
PCDH19Q8TAB3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH19Q8TAB3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDH19Q8TAB3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH19Q8TAB3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH19Q8TAB3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH19Q8TAB3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH19Q8TAB3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH19Q8TAB3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH19Q8TAB3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH19Q8TAB3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDH19Q8TAB3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 AC087289.5-201ENST00000586076 3175 ntBASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 KRT17P3-201ENST00000420566 1262 ntBASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 TUBB8P6-201ENST00000436895 1288 ntBASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
PCDH19Q8TAB3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 AC104417.2-201ENST00000562989 1793 ntBASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms