Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 BCL2-203ENST00000589955 5011 ntBASIC14.55□□□□□ -0.08
NUP35Q8NFH5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 AC138907.5-202ENST00000569484 235 ntBASIC14.54□□□□□ -0.08
NUP35Q8NFH5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 FP475955.4-201ENST00000623131 1990 ntBASIC14.54□□□□□ -0.08
NUP35Q8NFH5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NUP35Q8NFH5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 AC067852.2-201ENST00000590513 2313 ntBASIC14.53□□□□□ -0.08
NUP35Q8NFH5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 TEX21P-204ENST00000641479 1693 ntBASIC14.53□□□□□ -0.08
NUP35Q8NFH5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 KRT8P17-201ENST00000453110 1448 ntBASIC14.53□□□□□ -0.08
NUP35Q8NFH5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NUP35Q8NFH5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NUP35Q8NFH5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NUP35Q8NFH5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NUP35Q8NFH5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.52□□□□□ -0.09
NUP35Q8NFH5 AC091799.1-201ENST00000422823 811 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms