Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC63Q8NA47 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC63Q8NA47 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 AC009237.14-201ENST00000609975 1594 ntBASIC19.7■□□□□ 0.74
CCDC63Q8NA47 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 MYCNOS-205ENST00000641950 531 ntBASIC19.7■□□□□ 0.74
CCDC63Q8NA47 CYP21A1P-202ENST00000354927 1481 ntBASIC19.7■□□□□ 0.74
CCDC63Q8NA47 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC63Q8NA47 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC63Q8NA47 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC63Q8NA47 KRT16P6-202ENST00000425692 1426 ntBASIC19.68■□□□□ 0.74
CCDC63Q8NA47 AL390961.4-201ENST00000623958 2535 ntBASIC19.68■□□□□ 0.74
CCDC63Q8NA47 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC63Q8NA47 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC63Q8NA47 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC63Q8NA47 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms