Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC89Q8N998 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC89Q8N998 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.17■□□□□ 0.82
CCDC89Q8N998 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC89Q8N998 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC89Q8N998 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC89Q8N998 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC89Q8N998 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC89Q8N998 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC89Q8N998 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC89Q8N998 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC89Q8N998 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC89Q8N998 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC89Q8N998 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC89Q8N998 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC89Q8N998 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC89Q8N998 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC89Q8N998 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC89Q8N998 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC89Q8N998 AC116351.2-201ENST00000606540 1585 ntBASIC20.17■□□□□ 0.82
CCDC89Q8N998 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC89Q8N998 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC89Q8N998 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CCDC89Q8N998 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC89Q8N998 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 MIR663A-201ENST00000385250 93 ntBASIC20.16■□□□□ 0.82
CCDC89Q8N998 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC89Q8N998 AL390719.1-204ENST00000412397 1219 ntBASIC20.16■□□□□ 0.82
CCDC89Q8N998 CDCA4P2-201ENST00000441182 718 ntBASIC20.16■□□□□ 0.82
CCDC89Q8N998 AL137784.2-201ENST00000607332 1000 ntBASIC20.16■□□□□ 0.82
CCDC89Q8N998 IKBKGP1-201ENST00000612193 1073 ntBASIC20.16■□□□□ 0.82
CCDC89Q8N998 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 AC020763.4-201ENST00000623414 4170 ntBASIC20.16■□□□□ 0.82
CCDC89Q8N998 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC89Q8N998 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC89Q8N998 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC89Q8N998 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC89Q8N998 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 AC026185.1-201ENST00000445748 174 ntBASIC20.15■□□□□ 0.82
CCDC89Q8N998 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.15■□□□□ 0.82
CCDC89Q8N998 AL050303.2-201ENST00000619798 666 ntBASIC20.15■□□□□ 0.82
CCDC89Q8N998 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC89Q8N998 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC89Q8N998 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC89Q8N998 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC89Q8N998 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC89Q8N998 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC89Q8N998 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC89Q8N998 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC89Q8N998 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC89Q8N998 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC89Q8N998 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC89Q8N998 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC89Q8N998 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC89Q8N998 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC89Q8N998 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC89Q8N998 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC89Q8N998 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC89Q8N998 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC89Q8N998 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC89Q8N998 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC89Q8N998 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC89Q8N998 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC89Q8N998 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC89Q8N998 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC89Q8N998 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC89Q8N998 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC89Q8N998 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC89Q8N998 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC89Q8N998 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC89Q8N998 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC89Q8N998 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC89Q8N998 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC89Q8N998 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC89Q8N998 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC89Q8N998 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms