Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSMEM1Q8N8F7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 AL121829.2-201ENST00000620908 328 ntBASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 AP006587.1-201ENST00000534129 1502 ntBASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LSMEM1Q8N8F7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 YBX1P10-201ENST00000444752 975 ntBASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSMEM1Q8N8F7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 AC008687.6-201ENST00000596318 630 ntBASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.79■□□□□ 0.44
LSMEM1Q8N8F7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.78■□□□□ 0.44
LSMEM1Q8N8F7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSMEM1Q8N8F7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSMEM1Q8N8F7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LSMEM1Q8N8F7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSMEM1Q8N8F7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LSMEM1Q8N8F7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
LSMEM1Q8N8F7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
LSMEM1Q8N8F7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms