Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPSF7Q8N684 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPSF7Q8N684 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPSF7Q8N684 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CPSF7Q8N684 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPSF7Q8N684 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CPSF7Q8N684 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19■□□□□ 0.63
CPSF7Q8N684 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPSF7Q8N684 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPSF7Q8N684 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CPSF7Q8N684 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19■□□□□ 0.63
CPSF7Q8N684 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPSF7Q8N684 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19■□□□□ 0.63
CPSF7Q8N684 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPSF7Q8N684 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CPSF7Q8N684 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CPSF7Q8N684 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CPSF7Q8N684 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CPSF7Q8N684 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPSF7Q8N684 AC010980.2-201ENST00000587099 1412 ntBASIC19■□□□□ 0.63
CPSF7Q8N684 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPSF7Q8N684 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 AC092118.2-201ENST00000613495 667 ntBASIC18.99■□□□□ 0.63
CPSF7Q8N684 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.99■□□□□ 0.63
CPSF7Q8N684 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPSF7Q8N684 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 TMEM191A-211ENST00000637163 1067 ntBASIC18.98■□□□□ 0.63
CPSF7Q8N684 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPSF7Q8N684 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.98■□□□□ 0.63
CPSF7Q8N684 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CPSF7Q8N684 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CPSF7Q8N684 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.97■□□□□ 0.63
CPSF7Q8N684 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CPSF7Q8N684 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.97■□□□□ 0.63
CPSF7Q8N684 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.97■□□□□ 0.63
CPSF7Q8N684 RNA5SP413-201ENST00000516373 109 ntBASIC18.97■□□□□ 0.63
CPSF7Q8N684 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CPSF7Q8N684 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CPSF7Q8N684 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPSF7Q8N684 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms