Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 AC133561.5-201ENST00000635547 218 ntBASIC17.16■□□□□ 0.34
RTTNQ86VV8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 AC093484.2-201ENST00000580996 2166 ntBASIC17.16■□□□□ 0.34
RTTNQ86VV8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTTNQ86VV8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTTNQ86VV8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTTNQ86VV8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTTNQ86VV8 ARMC10P1-201ENST00000313754 855 ntBASIC17.15■□□□□ 0.34
RTTNQ86VV8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTTNQ86VV8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTTNQ86VV8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 Z99916.2-201ENST00000604037 246 ntBASIC17.15■□□□□ 0.34
RTTNQ86VV8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTTNQ86VV8 AP001271.2-201ENST00000624018 1556 ntBASIC17.15■□□□□ 0.34
RTTNQ86VV8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTTNQ86VV8 PHGDH-210ENST00000641115 1638 ntBASIC17.15■□□□□ 0.34
RTTNQ86VV8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTTNQ86VV8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RTTNQ86VV8 Z82202.1-201ENST00000623446 1880 ntBASIC17.15■□□□□ 0.34
RTTNQ86VV8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
RTTNQ86VV8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RTTNQ86VV8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
RTTNQ86VV8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
RTTNQ86VV8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTTNQ86VV8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTTNQ86VV8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTTNQ86VV8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.14■□□□□ 0.33
RTTNQ86VV8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTTNQ86VV8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.14■□□□□ 0.33
RTTNQ86VV8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTTNQ86VV8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTTNQ86VV8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RTTNQ86VV8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTTNQ86VV8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTTNQ86VV8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.14■□□□□ 0.33
RTTNQ86VV8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.14■□□□□ 0.33
RTTNQ86VV8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTTNQ86VV8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTTNQ86VV8 TFP1-202ENST00000475455 1573 ntBASIC17.14■□□□□ 0.33
RTTNQ86VV8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 KRT16P6-202ENST00000425692 1426 ntBASIC17.13■□□□□ 0.33
RTTNQ86VV8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 KRT17P3-201ENST00000420566 1262 ntBASIC17.13■□□□□ 0.33
RTTNQ86VV8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 AL121906.2-201ENST00000621597 723 ntBASIC17.13■□□□□ 0.33
RTTNQ86VV8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms