Protein–RNA interactions for Protein: Q86UP0

CDH24, Cadherin-24, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24Q86UP0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH24Q86UP0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH24Q86UP0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH24Q86UP0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH24Q86UP0 POM121L13P-201ENST00000422362 380 ntBASIC17.79■□□□□ 0.44
CDH24Q86UP0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH24Q86UP0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDH24Q86UP0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH24Q86UP0 FAM21FP-204ENST00000608637 956 ntBASIC17.79■□□□□ 0.44
CDH24Q86UP0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
CDH24Q86UP0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
CDH24Q86UP0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CDH24Q86UP0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CDH24Q86UP0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH24Q86UP0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH24Q86UP0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH24Q86UP0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDH24Q86UP0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH24Q86UP0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH24Q86UP0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 CD177P1-201ENST00000606252 935 ntBASIC17.78■□□□□ 0.44
CDH24Q86UP0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 AL135905.2-201ENST00000584934 1404 ntBASIC17.78■□□□□ 0.44
CDH24Q86UP0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH24Q86UP0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CDH24Q86UP0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CDH24Q86UP0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH24Q86UP0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH24Q86UP0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 AC027702.1-201ENST00000563810 1770 ntBASIC17.77■□□□□ 0.44
CDH24Q86UP0 AC020763.4-201ENST00000623414 4170 ntBASIC17.77■□□□□ 0.44
CDH24Q86UP0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH24Q86UP0 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.77■□□□□ 0.44
CDH24Q86UP0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH24Q86UP0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
CDH24Q86UP0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH24Q86UP0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.77■□□□□ 0.43
CDH24Q86UP0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH24Q86UP0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH24Q86UP0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
CDH24Q86UP0 AIRN-201ENST00000601203 4374 ntBASIC17.77■□□□□ 0.43
CDH24Q86UP0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH24Q86UP0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDH24Q86UP0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH24Q86UP0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CDH24Q86UP0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH24Q86UP0 CDV3P1-201ENST00000471403 739 ntBASIC17.76■□□□□ 0.43
CDH24Q86UP0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH24Q86UP0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH24Q86UP0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CDH24Q86UP0 AC012306.2-201ENST00000609350 630 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms