Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.625e-11■■□□□ 14.1
LARP4Q71RC2 RPS19BP1-203ENST00000459956 852 ntTSL 218.86■□□□□ 0.617e-7■■□□□ 14.1
LARP4Q71RC2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.67e-7■■□□□ 14.1
LARP4Q71RC2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.567e-7■■□□□ 14.1
LARP4Q71RC2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.06■□□□□ 0.487e-7■■□□□ 14.1
LARP4Q71RC2 RPS19BP1-202ENST00000420879 861 ntTSL 217.53■□□□□ 0.47e-7■■□□□ 14.1
LARP4Q71RC2 TBX2-AS1-204ENST00000591313 640 ntTSL 216.8■□□□□ 0.287e-7■■□□□ 14.1
LARP4Q71RC2 CMTM7-204ENST00000464689 2066 ntTSL 216.73■□□□□ 0.277e-7■■□□□ 14.1
LARP4Q71RC2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.277e-7■■□□□ 14.1
LARP4Q71RC2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.247e-7■■□□□ 14.1
LARP4Q71RC2 CLCN7-209ENST00000565092 2740 ntTSL 216.5■□□□□ 0.237e-7■■□□□ 14.1
LARP4Q71RC2 BABAM1-210ENST00000598567 534 ntAPPRIS ALT2 TSL 316.15■□□□□ 0.187e-7■■□□□ 14.1
LARP4Q71RC2 BABAM1-215ENST00000601232 690 ntTSL 515.8■□□□□ 0.127e-7■■□□□ 14.1
LARP4Q71RC2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.17e-7■■□□□ 14.1
LARP4Q71RC2 TNKS1BP1-204ENST00000528882 4336 ntTSL 515.6■□□□□ 0.097e-7■■□□□ 14.1
LARP4Q71RC2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.087e-7■■□□□ 14.1
LARP4Q71RC2 TBX2-AS1-205ENST00000592009 330 ntTSL 315.37■□□□□ 0.057e-7■■□□□ 14.1
LARP4Q71RC2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.057e-7■■□□□ 14.1
LARP4Q71RC2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.057e-7■■□□□ 14.1
LARP4Q71RC2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.057e-7■■□□□ 14.1
LARP4Q71RC2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.047e-7■■□□□ 14.1
LARP4Q71RC2 GRK6-210ENST00000515666 2141 ntTSL 515.29■□□□□ 0.047e-7■■□□□ 14.1
LARP4Q71RC2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.18■□□□□ 0.027e-7■■□□□ 14.1
LARP4Q71RC2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.025e-9■■□□□ 14.1
LARP4Q71RC2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.017e-7■■□□□ 14.1
LARP4Q71RC2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.017e-7■■□□□ 14.1
LARP4Q71RC2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.62□□□□□ -0.077e-7■■□□□ 14.1
LARP4Q71RC2 AAMDC-205ENST00000526164 726 ntTSL 214.51□□□□□ -0.097e-7■■□□□ 14.1
LARP4Q71RC2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.137e-7■■□□□ 14.1
LARP4Q71RC2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.187e-7■■□□□ 14.1
LARP4Q71RC2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.84□□□□□ -0.197e-7■■□□□ 14.1
LARP4Q71RC2 RPS19BP1-206ENST00000491966 647 ntTSL 213.63□□□□□ -0.237e-7■■□□□ 14.1
LARP4Q71RC2 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.52□□□□□ -0.247e-7■■□□□ 14.1
LARP4Q71RC2 RPS19BP1-205ENST00000488602 2801 ntTSL 213.49□□□□□ -0.257e-7■■□□□ 14.1
LARP4Q71RC2 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.257e-7■■□□□ 14.1
LARP4Q71RC2 CLCN7-205ENST00000563642 4184 ntTSL 213.47□□□□□ -0.257e-7■■□□□ 14.1
LARP4Q71RC2 TNKS1BP1-206ENST00000532273 592 ntTSL 212.35□□□□□ -0.437e-7■■□□□ 14.1
LARP4Q71RC2 BABAM1-204ENST00000594247 1004 ntTSL 512.29□□□□□ -0.447e-7■■□□□ 14.1
LARP4Q71RC2 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC11.51□□□□□ -0.577e-7■■□□□ 14.1
LARP4Q71RC2 AAMDC-211ENST00000533193 606 ntTSL 5 BASIC11.5□□□□□ -0.577e-7■■□□□ 14.1
LARP4Q71RC2 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.587e-7■■□□□ 14.1
LARP4Q71RC2 AAMDC-201ENST00000304716 619 ntTSL 1 (best) BASIC11.1□□□□□ -0.637e-7■■□□□ 14.1
LARP4Q71RC2 CCT5-203ENST00000503026 1933 ntTSL 2 BASIC11.04□□□□□ -0.647e-7■■□□□ 14.1
LARP4Q71RC2 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC10.81□□□□□ -0.687e-7■■□□□ 14.1
LARP4Q71RC2 AIFM2-203ENST00000482166 952 ntTSL 310.77□□□□□ -0.697e-7■■□□□ 14.1
LARP4Q71RC2 CMTM7-205ENST00000465248 780 ntTSL 210.72□□□□□ -0.697e-7■■□□□ 14.1
LARP4Q71RC2 CMTM7-206ENST00000487007 746 ntTSL 510.37□□□□□ -0.757e-7■■□□□ 14.1
LARP4Q71RC2 AC073869.1-202ENST00000438378 3785 ntTSL 1 (best) BASIC10.1□□□□□ -0.797e-7■■□□□ 14.1
LARP4Q71RC2 AAMDC-204ENST00000525409 421 ntTSL 3 BASIC9.63□□□□□ -0.877e-7■■□□□ 14.1
LARP4Q71RC2 AAMDC-212ENST00000630098 542 ntTSL 5 BASIC9.63□□□□□ -0.877e-7■■□□□ 14.1
LARP4Q71RC2 SCAMP3-206ENST00000478737 649 ntTSL 39.24□□□□□ -0.935e-11■■□□□ 14.1
LARP4Q71RC2 SCAMP3-205ENST00000472397 1030 ntTSL 39.12□□□□□ -0.955e-11■■□□□ 14.1
LARP4Q71RC2 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC8.96□□□□□ -0.987e-7■■□□□ 14.1
LARP4Q71RC2 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC8.83□□□□□ -17e-7■■□□□ 14.1
LARP4Q71RC2 CCT5-210ENST00000511995 1091 ntTSL 28.81□□□□□ -17e-7■■□□□ 14.1
LARP4Q71RC2 ANXA2-223ENST00000559647 484 ntTSL 28.36□□□□□ -1.077e-7■■□□□ 14.1
LARP4Q71RC2 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.93□□□□□ -1.147e-7■■□□□ 14.1
LARP4Q71RC2 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.187e-7■■□□□ 14.1
LARP4Q71RC2 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.287e-7■■□□□ 14.1
LARP4Q71RC2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.422e-10■■□□□ 14.1
LARP4Q71RC2 ATP5L-204ENST00000529460 457 ntTSL 310.39□□□□□ -0.752e-10■■□□□ 14.1
LARP4Q71RC2 ATP5L-207ENST00000533172 336 ntTSL 29.09□□□□□ -0.952e-10■■□□□ 14.1
LARP4Q71RC2 ATP5L-202ENST00000524422 720 ntTSL 3 BASIC8.43□□□□□ -1.062e-10■■□□□ 14.1
LARP4Q71RC2 ATP5L-205ENST00000529770 575 ntTSL 27.3□□□□□ -1.242e-10■■□□□ 14.1
LARP4Q71RC2 ATP5L-206ENST00000529790 900 ntTSL 25.53□□□□□ -1.522e-10■■□□□ 14.1
LARP4Q71RC2 HLA-C-205ENST00000466892 754 nt15.41■□□□□ 0.068e-9■■□□□ 14.1
LARP4Q71RC2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.187e-8■■□□□ 14.1
LARP4Q71RC2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.59■□□□□ 0.097e-8■■□□□ 14.1
LARP4Q71RC2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.8□□□□□ -0.047e-8■■□□□ 14.1
LARP4Q71RC2 SCAP-207ENST00000441517 3748 ntTSL 214.8□□□□□ -0.047e-8■■□□□ 14.1
LARP4Q71RC2 SCAP-202ENST00000320017 3430 ntTSL 214.74□□□□□ -0.057e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.281e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.311e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.421e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.451e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.731e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-207ENST00000596273 764 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.851e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.851e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.941e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.011e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.461e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-203ENST00000594527 357 ntTSL 35.5□□□□□ -1.531e-8■■□□□ 14.1
LARP4Q71RC2 UBA52-206ENST00000596272 508 ntTSL 24.69□□□□□ -1.661e-8■■□□□ 14.1
LARP4Q71RC2 OS9-208ENST00000546916 1028 ntTSL 218.63■□□□□ 0.574e-11■■□□□ 14.1
LARP4Q71RC2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.742e-7■■□□□ 14.1
LARP4Q71RC2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.245e-25■■□□□ 14.1
LARP4Q71RC2 RPS14-205ENST00000519690 3119 ntTSL 215.15■□□□□ 0.025e-25■■□□□ 14.1
LARP4Q71RC2 RPS14-202ENST00000401695 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.735e-25■■□□□ 14.1
LARP4Q71RC2 HBE1-203ENST00000396895 578 ntTSL 55.23□□□□□ -1.578e-7■■□□□ 14.1
LARP4Q71RC2 LIME1-204ENST00000476183 809 ntAPPRIS ALT2 TSL 519.33■□□□□ 0.689e-8■■□□□ 14.1
LARP4Q71RC2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.549e-8■■□□□ 14.1
LARP4Q71RC2 RPS16-203ENST00000595386 1035 ntTSL 214.64□□□□□ -0.072e-27■■□□□ 14.1
LARP4Q71RC2 RPS16-208ENST00000602153 444 ntTSL 29.62□□□□□ -0.872e-27■■□□□ 14.1
LARP4Q71RC2 HLA-B-258ENST00000640615 240 ntBASIC8.39□□□□□ -1.075e-7■■□□□ 14.1
LARP4Q71RC2 TMED9-206ENST00000513799 772 ntTSL 211.27□□□□□ -0.613e-14■■□□□ 14.1
LARP4Q71RC2 AP2A1-208ENST00000601356 2238 nt23.23■■□□□ 1.313e-9■■□□□ 14.1
LARP4Q71RC2 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.573e-9■■□□□ 14.1
LARP4Q71RC2 AP2A1-202ENST00000359032 3286 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.573e-9■■□□□ 14.1
LARP4Q71RC2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.556e-35■■□□□ 14.1
LARP4Q71RC2 RPS14-207ENST00000521466 592 ntAPPRIS P1 TSL 512.78□□□□□ -0.366e-35■■□□□ 14.1
Retrieved 100 of 15,922 protein–RNA pairs in 251.2 ms