Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP43Q70EL4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.67■□□□□ 0.42
USP43Q70EL4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
USP43Q70EL4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP43Q70EL4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.67■□□□□ 0.42
USP43Q70EL4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP43Q70EL4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP43Q70EL4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP43Q70EL4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP43Q70EL4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.66■□□□□ 0.42
USP43Q70EL4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
USP43Q70EL4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
USP43Q70EL4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.66■□□□□ 0.42
USP43Q70EL4 AC104771.1-201ENST00000603335 964 ntBASIC17.66■□□□□ 0.42
USP43Q70EL4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.66■□□□□ 0.42
USP43Q70EL4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
USP43Q70EL4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
USP43Q70EL4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
USP43Q70EL4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.66■□□□□ 0.42
USP43Q70EL4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP43Q70EL4 AC009237.14-201ENST00000609975 1594 ntBASIC17.66■□□□□ 0.42
USP43Q70EL4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.66■□□□□ 0.42
USP43Q70EL4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP43Q70EL4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
USP43Q70EL4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
USP43Q70EL4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
USP43Q70EL4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.65■□□□□ 0.42
USP43Q70EL4 AC004854.2-201ENST00000608450 1441 ntBASIC17.65■□□□□ 0.42
USP43Q70EL4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP43Q70EL4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP43Q70EL4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.65■□□□□ 0.42
USP43Q70EL4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP43Q70EL4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP43Q70EL4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP43Q70EL4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP43Q70EL4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP43Q70EL4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USP43Q70EL4 AC006970.2-201ENST00000450065 779 ntBASIC17.65■□□□□ 0.42
USP43Q70EL4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.65■□□□□ 0.42
USP43Q70EL4 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.65■□□□□ 0.42
USP43Q70EL4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
USP43Q70EL4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP43Q70EL4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.65■□□□□ 0.42
USP43Q70EL4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP43Q70EL4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP43Q70EL4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP43Q70EL4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP43Q70EL4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.65■□□□□ 0.42
USP43Q70EL4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP43Q70EL4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP43Q70EL4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.64■□□□□ 0.41
USP43Q70EL4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP43Q70EL4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.64■□□□□ 0.41
USP43Q70EL4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP43Q70EL4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
USP43Q70EL4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.64■□□□□ 0.41
USP43Q70EL4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.64■□□□□ 0.41
USP43Q70EL4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP43Q70EL4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.64■□□□□ 0.41
USP43Q70EL4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP43Q70EL4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP43Q70EL4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP43Q70EL4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP43Q70EL4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP43Q70EL4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.63■□□□□ 0.41
USP43Q70EL4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.63■□□□□ 0.41
USP43Q70EL4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.63■□□□□ 0.41
USP43Q70EL4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP43Q70EL4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP43Q70EL4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP43Q70EL4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP43Q70EL4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP43Q70EL4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.63■□□□□ 0.41
USP43Q70EL4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.63■□□□□ 0.41
USP43Q70EL4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP43Q70EL4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP43Q70EL4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms