Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
MRPL54Q6P161 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
MRPL54Q6P161 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 AC239859.2-201ENST00000444165 318 ntBASIC14.7□□□□□ -0.06
MRPL54Q6P161 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MRPL54Q6P161 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.7□□□□□ -0.06
MRPL54Q6P161 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 AL354751.1-201ENST00000412768 1863 ntBASIC14.69□□□□□ -0.06
MRPL54Q6P161 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 EEF1DP3-203ENST00000566025 782 ntBASIC14.69□□□□□ -0.06
MRPL54Q6P161 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
MRPL54Q6P161 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL54Q6P161 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 BICD1-207ENST00000551848 1962 ntBASIC14.68□□□□□ -0.06
MRPL54Q6P161 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 SERBP1P1-201ENST00000396021 1160 ntBASIC14.68□□□□□ -0.06
MRPL54Q6P161 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 AC136469.2-201ENST00000623944 1028 ntBASIC14.68□□□□□ -0.06
MRPL54Q6P161 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL54Q6P161 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.68□□□□□ -0.06
MRPL54Q6P161 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms