Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4R3AQ6IN85 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 AL353708.3-201ENST00000610272 989 ntBASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3AQ6IN85 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 HTR7P1-201ENST00000538670 1336 ntBASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC22.1■■□□□ 1.13
PPP4R3AQ6IN85 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms