Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 KRT18P29-201ENST00000397031 1267 ntBASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 C1QL1P1-201ENST00000568105 661 ntBASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 AC004264.1-201ENST00000608354 794 ntBASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN20Q4JDL3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 RPPH1-201ENST00000516869 333 ntBASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 AC110285.5-201ENST00000611501 352 ntBASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 AL032819.2-201ENST00000624543 2162 ntBASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 AC104417.2-201ENST00000562989 1793 ntBASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN20Q4JDL3 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 KRT16P5-201ENST00000455284 522 ntBASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN20Q4JDL3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 AC098590.1-201ENST00000468126 897 ntBASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 AL359736.2-201ENST00000621992 437 ntBASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms