Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 FAM21FP-204ENST00000608637 956 ntBASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 AIRN-201ENST00000601203 4374 ntBASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC6LQ2NKX8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ERCC6LQ2NKX8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC6LQ2NKX8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC6LQ2NKX8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC6LQ2NKX8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.58■□□□□ 0.89
ERCC6LQ2NKX8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC6LQ2NKX8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.58■□□□□ 0.89
ERCC6LQ2NKX8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.58■□□□□ 0.89
ERCC6LQ2NKX8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
ERCC6LQ2NKX8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ERCC6LQ2NKX8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ERCC6LQ2NKX8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ERCC6LQ2NKX8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ERCC6LQ2NKX8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ERCC6LQ2NKX8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ERCC6LQ2NKX8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ERCC6LQ2NKX8 AL512353.2-201ENST00000448759 1962 ntBASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 PTBP1P-201ENST00000554374 1601 ntBASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ERCC6LQ2NKX8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 AC233992.3-201ENST00000607491 485 ntBASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC6LQ2NKX8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.55■□□□□ 0.88
ERCC6LQ2NKX8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms