Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HMGCS1Q01581 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGCS1Q01581 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGCS1Q01581 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGCS1Q01581 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGCS1Q01581 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.74■□□□□ 0.59
HMGCS1Q01581 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
HMGCS1Q01581 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCS1Q01581 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.73■□□□□ 0.59
HMGCS1Q01581 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 AC083880.1-201ENST00000608266 535 ntBASIC18.73■□□□□ 0.59
HMGCS1Q01581 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 HLA-B-256ENST00000639848 1089 ntBASIC18.73■□□□□ 0.59
HMGCS1Q01581 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMGCS1Q01581 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS1Q01581 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HMGCS1Q01581 PNMA6B-201ENST00000538162 1200 ntBASIC18.72■□□□□ 0.59
HMGCS1Q01581 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.72■□□□□ 0.59
HMGCS1Q01581 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
HMGCS1Q01581 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.72■□□□□ 0.59
HMGCS1Q01581 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCS1Q01581 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS1Q01581 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCS1Q01581 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HMGCS1Q01581 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HMGCS1Q01581 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCS1Q01581 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.71■□□□□ 0.59
HMGCS1Q01581 AC060766.5-201ENST00000590539 871 ntBASIC18.71■□□□□ 0.59
HMGCS1Q01581 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.71■□□□□ 0.59
HMGCS1Q01581 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.71■□□□□ 0.59
HMGCS1Q01581 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCS1Q01581 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCS1Q01581 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HMGCS1Q01581 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS1Q01581 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.71■□□□□ 0.58
HMGCS1Q01581 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms