Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 GABARAPL3-202ENST00000624044 1851 ntBASIC17.12■□□□□ 0.33
NKX6-1P78426 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.11■□□□□ 0.33
NKX6-1P78426 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NKX6-1P78426 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.11■□□□□ 0.33
NKX6-1P78426 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 AF186192.3-201ENST00000583427 947 ntBASIC17.11■□□□□ 0.33
NKX6-1P78426 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.11■□□□□ 0.33
NKX6-1P78426 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.11■□□□□ 0.33
NKX6-1P78426 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
NKX6-1P78426 HTR7P1-201ENST00000538670 1336 ntBASIC17.11■□□□□ 0.33
NKX6-1P78426 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
NKX6-1P78426 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NKX6-1P78426 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
NKX6-1P78426 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NKX6-1P78426 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.1■□□□□ 0.33
NKX6-1P78426 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NKX6-1P78426 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NKX6-1P78426 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.1■□□□□ 0.33
NKX6-1P78426 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NKX6-1P78426 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NKX6-1P78426 AL353807.1-201ENST00000427475 662 ntBASIC17.1■□□□□ 0.33
NKX6-1P78426 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NKX6-1P78426 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.1■□□□□ 0.33
NKX6-1P78426 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.1■□□□□ 0.33
NKX6-1P78426 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.1■□□□□ 0.33
NKX6-1P78426 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
NKX6-1P78426 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.1■□□□□ 0.33
NKX6-1P78426 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.1■□□□□ 0.33
NKX6-1P78426 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.1■□□□□ 0.33
NKX6-1P78426 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.1■□□□□ 0.33
NKX6-1P78426 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 MIR6786-201ENST00000616843 113 ntBASIC17.1■□□□□ 0.33
NKX6-1P78426 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.1■□□□□ 0.33
NKX6-1P78426 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.1■□□□□ 0.33
NKX6-1P78426 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NKX6-1P78426 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
NKX6-1P78426 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.1■□□□□ 0.33
NKX6-1P78426 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NKX6-1P78426 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
NKX6-1P78426 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NKX6-1P78426 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.09■□□□□ 0.33
NKX6-1P78426 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
NKX6-1P78426 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NKX6-1P78426 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.09■□□□□ 0.33
NKX6-1P78426 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.09■□□□□ 0.33
NKX6-1P78426 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.09■□□□□ 0.33
NKX6-1P78426 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.09■□□□□ 0.33
NKX6-1P78426 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.09■□□□□ 0.33
NKX6-1P78426 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.09■□□□□ 0.33
NKX6-1P78426 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.09■□□□□ 0.33
NKX6-1P78426 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 BX119927.1-201ENST00000636596 1552 ntBASIC17.09■□□□□ 0.33
NKX6-1P78426 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NKX6-1P78426 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms