Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 CYP21A1P-202ENST00000354927 1481 ntBASIC13.76□□□□□ -0.21
RPL39P62891 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 AC008406.3-201ENST00000620001 1374 ntBASIC13.76□□□□□ -0.21
RPL39P62891 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.76□□□□□ -0.21
RPL39P62891 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.76□□□□□ -0.21
RPL39P62891 SLC7A5P1-201ENST00000568957 537 ntBASIC13.76□□□□□ -0.21
RPL39P62891 AC110285.6-201ENST00000617652 491 ntBASIC13.76□□□□□ -0.21
RPL39P62891 AL390961.4-201ENST00000623958 2535 ntBASIC13.76□□□□□ -0.21
RPL39P62891 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.76□□□□□ -0.21
RPL39P62891 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.76□□□□□ -0.21
RPL39P62891 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.76□□□□□ -0.21
RPL39P62891 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RPL39P62891 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.76□□□□□ -0.21
RPL39P62891 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.75□□□□□ -0.21
RPL39P62891 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.75□□□□□ -0.21
RPL39P62891 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 KRT8P20-201ENST00000423953 1409 ntBASIC13.75□□□□□ -0.21
RPL39P62891 AL133373.2-201ENST00000623187 2828 ntBASIC13.75□□□□□ -0.21
RPL39P62891 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.75□□□□□ -0.21
RPL39P62891 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RPL39P62891 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.75□□□□□ -0.21
RPL39P62891 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.75□□□□□ -0.21
RPL39P62891 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.75□□□□□ -0.21
RPL39P62891 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.75□□□□□ -0.21
RPL39P62891 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.75□□□□□ -0.21
RPL39P62891 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
RPL39P62891 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.75□□□□□ -0.21
RPL39P62891 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RPL39P62891 LTB4R2-202ENST00000528054 3092 ntBASIC13.75□□□□□ -0.21
RPL39P62891 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RPL39P62891 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RPL39P62891 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.75□□□□□ -0.21
RPL39P62891 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL39P62891 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
RPL39P62891 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RPL39P62891 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RPL39P62891 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL39P62891 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL39P62891 LINC02228-203ENST00000641970 1355 ntBASIC13.74□□□□□ -0.21
RPL39P62891 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL39P62891 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RPL39P62891 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RPL39P62891 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL39P62891 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.74□□□□□ -0.21
RPL39P62891 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.74□□□□□ -0.21
RPL39P62891 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.74□□□□□ -0.21
RPL39P62891 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.74□□□□□ -0.21
RPL39P62891 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.74□□□□□ -0.21
RPL39P62891 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms