Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN20P56880 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.83■□□□□ 0.45
CLDN20P56880 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN20P56880 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN20P56880 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN20P56880 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN20P56880 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CLDN20P56880 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN20P56880 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN20P56880 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN20P56880 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CLDN20P56880 KRASP1-201ENST00000407852 552 ntBASIC17.83■□□□□ 0.44
CLDN20P56880 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.83■□□□□ 0.44
CLDN20P56880 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN20P56880 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.83■□□□□ 0.44
CLDN20P56880 PRKY-204ENST00000533551 1019 ntBASIC17.83■□□□□ 0.44
CLDN20P56880 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN20P56880 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.83■□□□□ 0.44
CLDN20P56880 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.83■□□□□ 0.44
CLDN20P56880 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.83■□□□□ 0.44
CLDN20P56880 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CLDN20P56880 AC124016.1-201ENST00000609552 612 ntBASIC17.83■□□□□ 0.44
CLDN20P56880 FAM197Y4-202ENST00000622692 608 ntBASIC17.83■□□□□ 0.44
CLDN20P56880 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN20P56880 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN20P56880 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN20P56880 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN20P56880 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN20P56880 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN20P56880 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN20P56880 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CLDN20P56880 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN20P56880 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN20P56880 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN20P56880 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN20P56880 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN20P56880 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CLDN20P56880 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN20P56880 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN20P56880 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN20P56880 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN20P56880 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.82■□□□□ 0.44
CLDN20P56880 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN20P56880 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CLDN20P56880 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.82■□□□□ 0.44
CLDN20P56880 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN20P56880 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN20P56880 AC066615.1-201ENST00000640911 628 ntBASIC17.82■□□□□ 0.44
CLDN20P56880 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN20P56880 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN20P56880 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN20P56880 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN20P56880 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLDN20P56880 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN20P56880 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLDN20P56880 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN20P56880 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN20P56880 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN20P56880 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN20P56880 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN20P56880 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN20P56880 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN20P56880 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDN20P56880 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLDN20P56880 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN20P56880 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN20P56880 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN20P56880 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLDN20P56880 PHGDH-210ENST00000641115 1638 ntBASIC17.8■□□□□ 0.44
CLDN20P56880 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN20P56880 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CLDN20P56880 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 AC116351.2-201ENST00000606540 1585 ntBASIC17.8■□□□□ 0.44
CLDN20P56880 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN20P56880 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms