Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDH15P55291 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH15P55291 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH15P55291 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH15P55291 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH15P55291 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CDH15P55291 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CDH15P55291 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH15P55291 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDH15P55291 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH15P55291 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CDH15P55291 AL354751.1-201ENST00000412768 1863 ntBASIC18.1■□□□□ 0.49
CDH15P55291 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH15P55291 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDH15P55291 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH15P55291 AC016769.1-201ENST00000409132 1010 ntBASIC18.1■□□□□ 0.49
CDH15P55291 AC006015.1-201ENST00000429970 570 ntBASIC18.1■□□□□ 0.49
CDH15P55291 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH15P55291 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.1■□□□□ 0.49
CDH15P55291 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH15P55291 KRT18P61-201ENST00000585825 1298 ntBASIC18.1■□□□□ 0.49
CDH15P55291 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH15P55291 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH15P55291 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH15P55291 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH15P55291 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDH15P55291 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH15P55291 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDH15P55291 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 AL161938.1-201ENST00000569833 2180 ntBASIC18.09■□□□□ 0.49
CDH15P55291 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH15P55291 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH15P55291 AC137761.2-201ENST00000561729 223 ntBASIC18.09■□□□□ 0.49
CDH15P55291 AC145350.3-201ENST00000569033 163 ntBASIC18.09■□□□□ 0.49
CDH15P55291 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDH15P55291 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH15P55291 AC139713.2-201ENST00000641328 2723 ntBASIC18.09■□□□□ 0.49
CDH15P55291 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDH15P55291 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH15P55291 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH15P55291 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH15P55291 AC009237.14-201ENST00000609975 1594 ntBASIC18.08■□□□□ 0.49
CDH15P55291 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH15P55291 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH15P55291 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH15P55291 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH15P55291 BICD1-207ENST00000551848 1962 ntBASIC18.08■□□□□ 0.49
CDH15P55291 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH15P55291 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH15P55291 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH15P55291 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH15P55291 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH15P55291 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH15P55291 AIRN-201ENST00000601203 4374 ntBASIC18.08■□□□□ 0.48
CDH15P55291 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH15P55291 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
CDH15P55291 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH15P55291 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH15P55291 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH15P55291 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH15P55291 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH15P55291 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH15P55291 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CDH15P55291 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH15P55291 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDH15P55291 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH15P55291 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH15P55291 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CDH15P55291 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH15P55291 AC067852.2-201ENST00000590513 2313 ntBASIC18.07■□□□□ 0.48
CDH15P55291 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms