Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKN2DP55273 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDKN2DP55273 TNXA-203ENST00000507684 2038 ntBASIC19.24■□□□□ 0.67
CDKN2DP55273 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKN2DP55273 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN2DP55273 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKN2DP55273 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN2DP55273 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN2DP55273 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN2DP55273 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN2DP55273 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.23■□□□□ 0.67
CDKN2DP55273 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKN2DP55273 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CDKN2DP55273 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN2DP55273 UNC93B5-201ENST00000530315 699 ntBASIC19.23■□□□□ 0.67
CDKN2DP55273 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDKN2DP55273 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN2DP55273 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDKN2DP55273 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDKN2DP55273 TEX21P-204ENST00000641479 1693 ntBASIC19.23■□□□□ 0.67
CDKN2DP55273 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKN2DP55273 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKN2DP55273 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDKN2DP55273 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKN2DP55273 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDKN2DP55273 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKN2DP55273 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN2DP55273 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN2DP55273 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKN2DP55273 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN2DP55273 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN2DP55273 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN2DP55273 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN2DP55273 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN2DP55273 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CDKN2DP55273 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKN2DP55273 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKN2DP55273 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN2DP55273 KRT8P8-201ENST00000434750 1448 ntBASIC19.22■□□□□ 0.67
CDKN2DP55273 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDKN2DP55273 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN2DP55273 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN2DP55273 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDKN2DP55273 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKN2DP55273 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN2DP55273 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN2DP55273 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKN2DP55273 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDKN2DP55273 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDKN2DP55273 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKN2DP55273 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKN2DP55273 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKN2DP55273 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKN2DP55273 KRT18P16-201ENST00000510337 1294 ntBASIC19.21■□□□□ 0.67
CDKN2DP55273 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.21■□□□□ 0.67
CDKN2DP55273 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKN2DP55273 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 AC008403.3-201ENST00000598924 454 ntBASIC19.21■□□□□ 0.67
CDKN2DP55273 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN2DP55273 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CDKN2DP55273 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN2DP55273 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDKN2DP55273 AL020996.1-203ENST00000536896 2307 ntBASIC19.2■□□□□ 0.66
CDKN2DP55273 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN2DP55273 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDKN2DP55273 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN2DP55273 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDKN2DP55273 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKN2DP55273 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN2DP55273 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN2DP55273 LINC01465-201ENST00000408887 1940 ntBASIC19.2■□□□□ 0.66
CDKN2DP55273 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CDKN2DP55273 AC104417.2-201ENST00000562989 1793 ntBASIC19.2■□□□□ 0.66
CDKN2DP55273 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN2DP55273 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKN2DP55273 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDKN2DP55273 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDKN2DP55273 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN2DP55273 POM121L13P-201ENST00000422362 380 ntBASIC19.2■□□□□ 0.66
CDKN2DP55273 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.2■□□□□ 0.66
CDKN2DP55273 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.2■□□□□ 0.66
CDKN2DP55273 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKN2DP55273 SDHAP1-207ENST00000440850 2000 ntBASIC19.2■□□□□ 0.66
CDKN2DP55273 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms