Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AP002982.1-201ENST00000492365 877 ntBASIC19.84■□□□□ 0.77
ATXN3P54252 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATXN3P54252 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ATXN3P54252 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.84■□□□□ 0.77
ATXN3P54252 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.84■□□□□ 0.77
ATXN3P54252 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATXN3P54252 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATXN3P54252 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.84■□□□□ 0.77
ATXN3P54252 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATXN3P54252 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATXN3P54252 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATXN3P54252 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
ATXN3P54252 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATXN3P54252 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATXN3P54252 AC020907.5-201ENST00000624372 1936 ntBASIC19.83■□□□□ 0.77
ATXN3P54252 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATXN3P54252 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATXN3P54252 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATXN3P54252 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATXN3P54252 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.83■□□□□ 0.77
ATXN3P54252 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.83■□□□□ 0.77
ATXN3P54252 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.83■□□□□ 0.77
ATXN3P54252 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ATXN3P54252 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.83■□□□□ 0.77
ATXN3P54252 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.83■□□□□ 0.77
ATXN3P54252 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.83■□□□□ 0.77
ATXN3P54252 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.83■□□□□ 0.77
ATXN3P54252 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.83■□□□□ 0.77
ATXN3P54252 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATXN3P54252 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.83■□□□□ 0.77
ATXN3P54252 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATXN3P54252 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
ATXN3P54252 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATXN3P54252 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ATXN3P54252 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ATXN3P54252 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATXN3P54252 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATXN3P54252 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.82■□□□□ 0.76
ATXN3P54252 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ATXN3P54252 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.82■□□□□ 0.76
ATXN3P54252 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATXN3P54252 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ATXN3P54252 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATXN3P54252 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
ATXN3P54252 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATXN3P54252 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATXN3P54252 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATXN3P54252 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATXN3P54252 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ATXN3P54252 AC005521.1-201ENST00000393351 872 ntBASIC19.82■□□□□ 0.76
ATXN3P54252 RBM17P1-201ENST00000453646 1190 ntBASIC19.82■□□□□ 0.76
ATXN3P54252 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.82■□□□□ 0.76
ATXN3P54252 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.82■□□□□ 0.76
ATXN3P54252 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.82■□□□□ 0.76
ATXN3P54252 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.82■□□□□ 0.76
ATXN3P54252 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.82■□□□□ 0.76
ATXN3P54252 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.82■□□□□ 0.76
ATXN3P54252 AL031963.3-201ENST00000606441 850 ntBASIC19.82■□□□□ 0.76
ATXN3P54252 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.82■□□□□ 0.76
ATXN3P54252 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ATXN3P54252 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATXN3P54252 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATXN3P54252 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATXN3P54252 LINC01568-207ENST00000641790 1380 ntBASIC19.82■□□□□ 0.76
ATXN3P54252 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.82■□□□□ 0.76
ATXN3P54252 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.81■□□□□ 0.76
ATXN3P54252 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.81■□□□□ 0.76
ATXN3P54252 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATXN3P54252 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATXN3P54252 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATXN3P54252 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ATXN3P54252 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.81■□□□□ 0.76
ATXN3P54252 MIR1238-201ENST00000408483 83 ntBASIC19.81■□□□□ 0.76
ATXN3P54252 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.81■□□□□ 0.76
ATXN3P54252 AL121906.2-201ENST00000621597 723 ntBASIC19.81■□□□□ 0.76
ATXN3P54252 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATXN3P54252 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATXN3P54252 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATXN3P54252 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATXN3P54252 AL512408.1-201ENST00000569378 2000 ntBASIC19.81■□□□□ 0.76
ATXN3P54252 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATXN3P54252 AL020996.1-203ENST00000536896 2307 ntBASIC19.81■□□□□ 0.76
ATXN3P54252 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.81■□□□□ 0.76
ATXN3P54252 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATXN3P54252 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
ATXN3P54252 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.8■□□□□ 0.76
ATXN3P54252 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 AC121338.2-201ENST00000622535 1744 ntBASIC19.8■□□□□ 0.76
ATXN3P54252 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.8■□□□□ 0.76
ATXN3P54252 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ATXN3P54252 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.8■□□□□ 0.76
ATXN3P54252 NUDT16P1-203ENST00000513809 620 ntBASIC19.8■□□□□ 0.76
ATXN3P54252 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms