Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 HSPA8-205ENST00000525463 583 ntTSL 52.93□□□□□ -1.948e-14■■■□□ 15.6
SUB1P53999 HSPA8-214ENST00000531063 578 ntTSL 22.3□□□□□ -2.048e-14■■■□□ 15.6
SUB1P53999 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.023e-13■■■□□ 15.5
SUB1P53999 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.26□□□□□ -0.453e-13■■■□□ 15.5
SUB1P53999 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC6.65□□□□□ -1.343e-13■■■□□ 15.5
SUB1P53999 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.531e-8■■■□□ 15.5
SUB1P53999 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.41□□□□□ -1.548e-10■■■□□ 15.5
SUB1P53999 HERC2-208ENST00000566635 2114 ntTSL 1 (best)13.99□□□□□ -0.177e-7■■■□□ 15.5
SUB1P53999 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.472e-14■■■□□ 15.5
SUB1P53999 FLOT1-212ENST00000487376 1583 ntTSL 514.75□□□□□ -0.052e-14■■■□□ 15.5
SUB1P53999 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.66■□□□□ 0.269e-7■■■□□ 15.5
SUB1P53999 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.629e-7■■■□□ 15.5
SUB1P53999 RHOT2-219ENST00000568950 1343 ntTSL 516.57■□□□□ 0.245e-7■■■□□ 15.5
SUB1P53999 LASP1-203ENST00000433206 4023 ntTSL 2 BASIC9.19□□□□□ -0.943e-9■■■□□ 15.5
SUB1P53999 LASP1-201ENST00000318008 4109 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.973e-9■■■□□ 15.5
SUB1P53999 LASP1-204ENST00000435347 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.993e-9■■■□□ 15.5
SUB1P53999 SHMT2-231ENST00000557433 1904 ntTSL 1 (best)13.23□□□□□ -0.292e-7■■■□□ 15.5
SUB1P53999 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.23□□□□□ -0.292e-7■■■□□ 15.5
SUB1P53999 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.12□□□□□ -0.472e-7■■■□□ 15.5
SUB1P53999 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.02□□□□□ -0.652e-7■■■□□ 15.5
SUB1P53999 SHMT2-222ENST00000555774 2311 ntTSL 1 (best)10.95□□□□□ -0.662e-7■■■□□ 15.5
SUB1P53999 SHMT2-217ENST00000555116 1885 ntTSL 210.82□□□□□ -0.682e-7■■■□□ 15.5
SUB1P53999 SHMT2-226ENST00000556825 2215 ntTSL 1 (best)10.65□□□□□ -0.712e-7■■■□□ 15.5
SUB1P53999 SHMT2-233ENST00000557529 1369 ntTSL 210.01□□□□□ -0.812e-7■■■□□ 15.5
SUB1P53999 SHMT2-207ENST00000553837 2152 ntTSL 59.65□□□□□ -0.862e-7■■■□□ 15.5
SUB1P53999 SHMT2-212ENST00000554467 3416 ntTSL 29.28□□□□□ -0.922e-7■■■□□ 15.5
SUB1P53999 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.942e-7■■■□□ 15.5
SUB1P53999 BAG6-237ENST00000375976 3644 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.911e-7■■■□□ 15.4
SUB1P53999 RPLP0-204ENST00000546564 844 ntTSL 29.44□□□□□ -0.93e-7■■■□□ 15.4
SUB1P53999 RPLP0-213ENST00000548568 1127 ntTSL 1 (best)7.92□□□□□ -1.143e-7■■■□□ 15.4
SUB1P53999 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.18e-6■■■□□ 15.4
SUB1P53999 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.992e-13■■■□□ 15.4
SUB1P53999 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.92e-13■■■□□ 15.4
SUB1P53999 ECI1-202ENST00000561688 705 ntTSL 220.36■□□□□ 0.852e-13■■■□□ 15.4
SUB1P53999 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.01■□□□□ 0.792e-13■■■□□ 15.4
SUB1P53999 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.27■□□□□ 0.688e-6■■■□□ 15.4
SUB1P53999 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.618e-6■■■□□ 15.4
SUB1P53999 ECI1-204ENST00000563029 776 ntTSL 218.27■□□□□ 0.522e-13■■■□□ 15.4
SUB1P53999 ATP8B2-203ENST00000368490 473 ntTSL 317.58■□□□□ 0.48e-6■■■□□ 15.4
SUB1P53999 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.48e-6■■■□□ 15.4
SUB1P53999 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.398e-6■■■□□ 15.4
SUB1P53999 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.04■□□□□ 0.328e-6■■■□□ 15.4
SUB1P53999 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.01■□□□□ 0.318e-6■■■□□ 15.4
SUB1P53999 ECI1-206ENST00000566379 961 ntTSL 216.58■□□□□ 0.242e-13■■■□□ 15.4
SUB1P53999 NDUFS2-214ENST00000496133 815 ntTSL 516.46■□□□□ 0.231e-10■■■□□ 15.4
SUB1P53999 NPM3-204ENST00000474993 755 ntTSL 216.19■□□□□ 0.188e-6■■■□□ 15.4
SUB1P53999 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16■□□□□ 0.158e-6■■■□□ 15.4
SUB1P53999 NPM3-202ENST00000462391 481 ntTSL 315.95■□□□□ 0.148e-6■■■□□ 15.4
SUB1P53999 NDUFS2-204ENST00000467295 1060 ntTSL 315.65■□□□□ 0.11e-10■■■□□ 15.4
SUB1P53999 NDUFS2-215ENST00000496553 888 ntTSL 215.65■□□□□ 0.11e-10■■■□□ 15.4
SUB1P53999 NDUFS2-207ENST00000475570 506 ntTSL 215.51■□□□□ 0.071e-10■■■□□ 15.4
SUB1P53999 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.078e-6■■■□□ 15.4
SUB1P53999 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.46■□□□□ 0.068e-6■■■□□ 15.4
SUB1P53999 ARAP1-212ENST00000536885 639 ntTSL 215.35■□□□□ 0.058e-6■■■□□ 15.4
SUB1P53999 EPRS-204ENST00000477030 1526 ntTSL 1 (best)15.34■□□□□ 0.058e-6■■■□□ 15.4
SUB1P53999 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.018e-6■■■□□ 15.4
SUB1P53999 NDUFS2-208ENST00000478866 1076 ntTSL 214.93□□□□□ -0.021e-10■■■□□ 15.4
SUB1P53999 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.088e-6■■■□□ 15.4
SUB1P53999 ADCY7-215ENST00000570187 1320 ntTSL 214.3□□□□□ -0.128e-6■■■□□ 15.4
SUB1P53999 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.148e-6■■■□□ 15.4
SUB1P53999 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.148e-6■■■□□ 15.4
SUB1P53999 CYBA-203ENST00000562209 624 ntTSL 514.11□□□□□ -0.158e-6■■■□□ 15.4
SUB1P53999 TXNRD2-220ENST00000634537 1086 ntTSL 513.98□□□□□ -0.178e-6■■■□□ 15.4
SUB1P53999 TXNRD2-213ENST00000487165 2020 ntTSL 1 (best)13.89□□□□□ -0.198e-6■■■□□ 15.4
SUB1P53999 TMEM159-206ENST00000573487 1593 ntTSL 1 (best)13.51□□□□□ -0.258e-6■■■□□ 15.4
SUB1P53999 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.47□□□□□ -0.258e-6■■■□□ 15.4
SUB1P53999 VARS2-204ENST00000467717 863 ntTSL 313.29□□□□□ -0.288e-6■■■□□ 15.4
SUB1P53999 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.03□□□□□ -0.328e-6■■■□□ 15.4
SUB1P53999 NDUFS2-209ENST00000479948 681 ntTSL 313□□□□□ -0.331e-10■■■□□ 15.4
SUB1P53999 SUCLG2-202ENST00000460567 1596 ntTSL 1 (best)12.84□□□□□ -0.358e-6■■■□□ 15.4
SUB1P53999 TXNRD2-215ENST00000494454 2004 ntTSL 1 (best)12.65□□□□□ -0.388e-6■■■□□ 15.4
SUB1P53999 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.61□□□□□ -0.398e-6■■■□□ 15.4
SUB1P53999 SCAF1-204ENST00000601038 491 ntAPPRIS ALT2 TSL 312.48□□□□□ -0.418e-6■■■□□ 15.4
SUB1P53999 ATP7B-214ENST00000634810 5825 ntTSL 1 (best)12.47□□□□□ -0.418e-6■■■□□ 15.4
SUB1P53999 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.428e-6■■■□□ 15.4
SUB1P53999 TXNRD2-219ENST00000634471 748 ntTSL 312.38□□□□□ -0.438e-6■■■□□ 15.4
SUB1P53999 TXNRD2-207ENST00000462843 810 ntTSL 312.38□□□□□ -0.438e-6■■■□□ 15.4
SUB1P53999 ARAP1-214ENST00000541623 533 ntTSL 512.35□□□□□ -0.438e-6■■■□□ 15.4
SUB1P53999 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.29□□□□□ -0.448e-6■■■□□ 15.4
SUB1P53999 CYBA-202ENST00000561972 464 ntTSL 312.27□□□□□ -0.458e-6■■■□□ 15.4
SUB1P53999 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.458e-6■■■□□ 15.4
SUB1P53999 ADCY7-210ENST00000567277 2304 ntTSL 1 (best)12.23□□□□□ -0.458e-6■■■□□ 15.4
SUB1P53999 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.58e-6■■■□□ 15.4
SUB1P53999 HDLBP-241ENST00000487169 4339 ntTSL 211.92□□□□□ -0.58e-6■■■□□ 15.4
SUB1P53999 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.518e-6■■■□□ 15.4
SUB1P53999 VARS2-203ENST00000428017 1103 ntTSL 211.81□□□□□ -0.528e-6■■■□□ 15.4
SUB1P53999 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.77□□□□□ -0.528e-6■■■□□ 15.4
SUB1P53999 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.538e-6■■■□□ 15.4
SUB1P53999 MIIP-205ENST00000478749 779 ntTSL 211.69□□□□□ -0.548e-6■■■□□ 15.4
SUB1P53999 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.548e-6■■■□□ 15.4
SUB1P53999 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.548e-6■■■□□ 15.4
SUB1P53999 CYBA-204ENST00000563526 1052 ntTSL 211.57□□□□□ -0.568e-6■■■□□ 15.4
SUB1P53999 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.57□□□□□ -0.568e-6■■■□□ 15.4
SUB1P53999 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.52□□□□□ -0.578e-6■■■□□ 15.4
SUB1P53999 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.52□□□□□ -0.578e-6■■■□□ 15.4
SUB1P53999 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.36□□□□□ -0.598e-6■■■□□ 15.4
SUB1P53999 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.598e-6■■■□□ 15.4
SUB1P53999 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.23□□□□□ -0.618e-6■■■□□ 15.4
SUB1P53999 ARAP1-216ENST00000542596 699 ntTSL 511.2□□□□□ -0.628e-6■■■□□ 15.4
SUB1P53999 TXNRD2-216ENST00000495655 2700 ntTSL 211.08□□□□□ -0.648e-6■■■□□ 15.4
Retrieved 100 of 11,644 protein–RNA pairs in 132.7 ms