Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.24■□□□□ 0.99
CASP4P49662 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASP4P49662 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CASP4P49662 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CASP4P49662 KRT18P29-201ENST00000397031 1267 ntBASIC21.24■□□□□ 0.99
CASP4P49662 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.24■□□□□ 0.99
CASP4P49662 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.24■□□□□ 0.99
CASP4P49662 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.24■□□□□ 0.99
CASP4P49662 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.24■□□□□ 0.99
CASP4P49662 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.24■□□□□ 0.99
CASP4P49662 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.24■□□□□ 0.99
CASP4P49662 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.24■□□□□ 0.99
CASP4P49662 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CASP4P49662 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.24■□□□□ 0.99
CASP4P49662 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASP4P49662 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CASP4P49662 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CASP4P49662 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CASP4P49662 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.23■□□□□ 0.99
CASP4P49662 AC239809.2-201ENST00000415381 517 ntBASIC21.23■□□□□ 0.99
CASP4P49662 TUBB8P6-201ENST00000436895 1288 ntBASIC21.23■□□□□ 0.99
CASP4P49662 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.23■□□□□ 0.99
CASP4P49662 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.23■□□□□ 0.99
CASP4P49662 AC124016.1-201ENST00000609552 612 ntBASIC21.23■□□□□ 0.99
CASP4P49662 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CASP4P49662 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.23■□□□□ 0.99
CASP4P49662 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.23■□□□□ 0.99
CASP4P49662 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 ZNF815P-204ENST00000434898 1737 ntBASIC21.23■□□□□ 0.99
CASP4P49662 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.23■□□□□ 0.99
CASP4P49662 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASP4P49662 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CASP4P49662 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP4P49662 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP4P49662 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.22■□□□□ 0.99
CASP4P49662 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.22■□□□□ 0.99
CASP4P49662 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CASP4P49662 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP4P49662 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP4P49662 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CASP4P49662 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP4P49662 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CASP4P49662 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.22■□□□□ 0.99
CASP4P49662 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.22■□□□□ 0.99
CASP4P49662 C1QBPP2-201ENST00000528754 825 ntBASIC21.22■□□□□ 0.99
CASP4P49662 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CASP4P49662 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP4P49662 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CASP4P49662 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP4P49662 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.22■□□□□ 0.99
CASP4P49662 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.22■□□□□ 0.99
CASP4P49662 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.22■□□□□ 0.99
CASP4P49662 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP4P49662 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
CASP4P49662 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASP4P49662 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASP4P49662 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASP4P49662 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASP4P49662 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASP4P49662 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASP4P49662 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CASP4P49662 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.21■□□□□ 0.99
CASP4P49662 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.21■□□□□ 0.99
CASP4P49662 AC098590.1-201ENST00000468126 897 ntBASIC21.21■□□□□ 0.99
CASP4P49662 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.21■□□□□ 0.99
CASP4P49662 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASP4P49662 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.21■□□□□ 0.99
CASP4P49662 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASP4P49662 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CASP4P49662 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
CASP4P49662 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.21■□□□□ 0.99
CASP4P49662 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CASP4P49662 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASP4P49662 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.2■□□□□ 0.98
CASP4P49662 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.2■□□□□ 0.98
CASP4P49662 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.2■□□□□ 0.98
CASP4P49662 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.2■□□□□ 0.98
CASP4P49662 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CASP4P49662 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CASP4P49662 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.2■□□□□ 0.98
CASP4P49662 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.2■□□□□ 0.98
CASP4P49662 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CASP4P49662 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.2■□□□□ 0.98
CASP4P49662 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.2■□□□□ 0.98
CASP4P49662 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.2■□□□□ 0.98
CASP4P49662 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.2■□□□□ 0.98
CASP4P49662 AC104417.2-201ENST00000562989 1793 ntBASIC21.2■□□□□ 0.98
CASP4P49662 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASP4P49662 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms