Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL3P39023 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.47■□□□□ 0.55
RPL3P39023 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.47■□□□□ 0.55
RPL3P39023 PNMA6B-201ENST00000538162 1200 ntBASIC18.47■□□□□ 0.55
RPL3P39023 AL138781.1-201ENST00000566567 1274 ntBASIC18.47■□□□□ 0.55
RPL3P39023 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.47■□□□□ 0.55
RPL3P39023 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL3P39023 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.47■□□□□ 0.55
RPL3P39023 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL3P39023 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.47■□□□□ 0.55
RPL3P39023 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RPL3P39023 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL3P39023 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL3P39023 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPL3P39023 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.47■□□□□ 0.55
RPL3P39023 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.47■□□□□ 0.55
RPL3P39023 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.47■□□□□ 0.55
RPL3P39023 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.46■□□□□ 0.55
RPL3P39023 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL3P39023 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RPL3P39023 ZNF815P-204ENST00000434898 1737 ntBASIC18.46■□□□□ 0.55
RPL3P39023 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPL3P39023 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.46■□□□□ 0.55
RPL3P39023 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RPL3P39023 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.46■□□□□ 0.55
RPL3P39023 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.46■□□□□ 0.55
RPL3P39023 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.46■□□□□ 0.55
RPL3P39023 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.46■□□□□ 0.55
RPL3P39023 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.46■□□□□ 0.55
RPL3P39023 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL3P39023 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.46■□□□□ 0.55
RPL3P39023 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.46■□□□□ 0.55
RPL3P39023 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL3P39023 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL3P39023 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.46■□□□□ 0.55
RPL3P39023 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RPL3P39023 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.46■□□□□ 0.55
RPL3P39023 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL3P39023 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL3P39023 AP000974.1-201ENST00000623909 2387 ntBASIC18.46■□□□□ 0.55
RPL3P39023 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPL3P39023 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
RPL3P39023 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL3P39023 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.45■□□□□ 0.54
RPL3P39023 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.45■□□□□ 0.54
RPL3P39023 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL3P39023 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.45■□□□□ 0.54
RPL3P39023 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL3P39023 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL3P39023 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.45■□□□□ 0.54
RPL3P39023 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RPL3P39023 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPL3P39023 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.45■□□□□ 0.54
RPL3P39023 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.45■□□□□ 0.54
RPL3P39023 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.45■□□□□ 0.54
RPL3P39023 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.45■□□□□ 0.54
RPL3P39023 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL3P39023 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL3P39023 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.45■□□□□ 0.54
RPL3P39023 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL3P39023 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL3P39023 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPL3P39023 AC120498.9-201ENST00000339021 3867 ntBASIC18.45■□□□□ 0.54
RPL3P39023 AC087289.5-201ENST00000586076 3175 ntBASIC18.44■□□□□ 0.54
RPL3P39023 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPL3P39023 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RPL3P39023 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPL3P39023 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPL3P39023 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
RPL3P39023 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.44■□□□□ 0.54
RPL3P39023 KRT8P8-201ENST00000434750 1448 ntBASIC18.44■□□□□ 0.54
RPL3P39023 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPL3P39023 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPL3P39023 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.44■□□□□ 0.54
RPL3P39023 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.44■□□□□ 0.54
RPL3P39023 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.44■□□□□ 0.54
RPL3P39023 AL121829.2-201ENST00000620908 328 ntBASIC18.44■□□□□ 0.54
RPL3P39023 AC133041.1-202ENST00000642053 222 ntBASIC18.44■□□□□ 0.54
RPL3P39023 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPL3P39023 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPL3P39023 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.44■□□□□ 0.54
RPL3P39023 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RPL3P39023 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPL3P39023 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPL3P39023 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RPL3P39023 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPL3P39023 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPL3P39023 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPL3P39023 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPL3P39023 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPL3P39023 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.43■□□□□ 0.54
RPL3P39023 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPL3P39023 AC098818.2-201ENST00000564925 2320 ntBASIC18.43■□□□□ 0.54
RPL3P39023 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPL3P39023 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPL3P39023 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPL3P39023 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.43■□□□□ 0.54
RPL3P39023 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RPL3P39023 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RPL3P39023 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms