Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN6P29350 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN6P29350 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN6P29350 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN6P29350 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN6P29350 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN6P29350 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN6P29350 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PTPN6P29350 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN6P29350 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PTPN6P29350 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN6P29350 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPN6P29350 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PTPN6P29350 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN6P29350 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
PTPN6P29350 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN6P29350 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPN6P29350 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN6P29350 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN6P29350 HLA-B-256ENST00000639848 1089 ntBASIC18.46■□□□□ 0.55
PTPN6P29350 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 TFP1-202ENST00000475455 1573 ntBASIC18.46■□□□□ 0.55
PTPN6P29350 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PTPN6P29350 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PTPN6P29350 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
PTPN6P29350 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN6P29350 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
PTPN6P29350 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPN6P29350 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTPN6P29350 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PTPN6P29350 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN6P29350 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
PTPN6P29350 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN6P29350 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTPN6P29350 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN6P29350 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPN6P29350 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.45■□□□□ 0.54
PTPN6P29350 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPN6P29350 AC060766.5-201ENST00000590539 871 ntBASIC18.45■□□□□ 0.54
PTPN6P29350 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPN6P29350 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PTPN6P29350 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN6P29350 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PTPN6P29350 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN6P29350 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PTPN6P29350 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN6P29350 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN6P29350 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN6P29350 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN6P29350 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN6P29350 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN6P29350 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN6P29350 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN6P29350 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN6P29350 ABHD17AP1-201ENST00000358206 933 ntBASIC18.44■□□□□ 0.54
PTPN6P29350 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN6P29350 TSPY20P-201ENST00000450910 630 ntBASIC18.44■□□□□ 0.54
PTPN6P29350 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN6P29350 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PTPN6P29350 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PTPN6P29350 CROCCP3-202ENST00000420820 1947 ntBASIC18.44■□□□□ 0.54
PTPN6P29350 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN6P29350 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN6P29350 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN6P29350 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN6P29350 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN6P29350 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PTPN6P29350 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN6P29350 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN6P29350 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN6P29350 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN6P29350 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN6P29350 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.43■□□□□ 0.54
PTPN6P29350 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN6P29350 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.43■□□□□ 0.54
PTPN6P29350 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN6P29350 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN6P29350 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN6P29350 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms