Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TNFRSF1BP20333 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF1BP20333 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.08■□□□□ 0.48
TNFRSF1BP20333 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF1BP20333 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF1BP20333 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF1BP20333 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF1BP20333 TEX21P-204ENST00000641479 1693 ntBASIC18.08■□□□□ 0.48
TNFRSF1BP20333 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.08■□□□□ 0.48
TNFRSF1BP20333 AC116351.2-201ENST00000606540 1585 ntBASIC18.08■□□□□ 0.48
TNFRSF1BP20333 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.08■□□□□ 0.48
TNFRSF1BP20333 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF1BP20333 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 AL512625.2-201ENST00000417533 625 ntBASIC18.07■□□□□ 0.48
TNFRSF1BP20333 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.07■□□□□ 0.48
TNFRSF1BP20333 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 CROCCP3-202ENST00000420820 1947 ntBASIC18.06■□□□□ 0.48
TNFRSF1BP20333 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.06■□□□□ 0.48
TNFRSF1BP20333 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 AC022517.1-201ENST00000592429 346 ntBASIC18.05■□□□□ 0.48
TNFRSF1BP20333 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.05■□□□□ 0.48
TNFRSF1BP20333 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 AL050303.2-201ENST00000619798 666 ntBASIC18.04■□□□□ 0.48
TNFRSF1BP20333 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.04■□□□□ 0.48
TNFRSF1BP20333 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms