Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
H2AFXP16104 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
H2AFXP16104 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.25■□□□□ 0.83
H2AFXP16104 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.24■□□□□ 0.83
H2AFXP16104 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
H2AFXP16104 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.24■□□□□ 0.83
H2AFXP16104 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.24■□□□□ 0.83
H2AFXP16104 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
H2AFXP16104 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.24■□□□□ 0.83
H2AFXP16104 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.24■□□□□ 0.83
H2AFXP16104 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
H2AFXP16104 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.24■□□□□ 0.83
H2AFXP16104 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
H2AFXP16104 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2AFXP16104 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.24■□□□□ 0.83
H2AFXP16104 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.23■□□□□ 0.83
H2AFXP16104 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.23■□□□□ 0.83
H2AFXP16104 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.23■□□□□ 0.83
H2AFXP16104 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.23■□□□□ 0.83
H2AFXP16104 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.23■□□□□ 0.83
H2AFXP16104 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2AFXP16104 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
H2AFXP16104 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.22■□□□□ 0.83
H2AFXP16104 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
H2AFXP16104 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 ANO7L1-203ENST00000602586 1720 ntBASIC20.22■□□□□ 0.83
H2AFXP16104 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.22■□□□□ 0.83
H2AFXP16104 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.22■□□□□ 0.83
H2AFXP16104 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.22■□□□□ 0.83
H2AFXP16104 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 AC007322.3-201ENST00000426526 701 ntBASIC20.22■□□□□ 0.83
H2AFXP16104 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.22■□□□□ 0.83
H2AFXP16104 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
H2AFXP16104 AL356740.2-201ENST00000601559 647 ntBASIC20.22■□□□□ 0.83
H2AFXP16104 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.22■□□□□ 0.83
H2AFXP16104 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.22■□□□□ 0.83
H2AFXP16104 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.22■□□□□ 0.83
H2AFXP16104 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.22■□□□□ 0.83
H2AFXP16104 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.22■□□□□ 0.83
H2AFXP16104 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2AFXP16104 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.22■□□□□ 0.83
H2AFXP16104 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.21■□□□□ 0.83
H2AFXP16104 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.21■□□□□ 0.83
H2AFXP16104 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2AFXP16104 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
H2AFXP16104 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.21■□□□□ 0.83
H2AFXP16104 AC091799.1-201ENST00000422823 811 ntBASIC20.21■□□□□ 0.83
H2AFXP16104 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.21■□□□□ 0.83
H2AFXP16104 IGHV3-19-201ENST00000521488 291 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms