Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.06■□□□□ 0.32
UBCP0CG48 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBCP0CG48 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBCP0CG48 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBCP0CG48 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
UBCP0CG48 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBCP0CG48 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBCP0CG48 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.06■□□□□ 0.32
UBCP0CG48 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBCP0CG48 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.06■□□□□ 0.32
UBCP0CG48 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.06■□□□□ 0.32
UBCP0CG48 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBCP0CG48 RARRES2P6-201ENST00000567333 442 ntBASIC17.06■□□□□ 0.32
UBCP0CG48 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.06■□□□□ 0.32
UBCP0CG48 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.06■□□□□ 0.32
UBCP0CG48 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.06■□□□□ 0.32
UBCP0CG48 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBCP0CG48 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.06■□□□□ 0.32
UBCP0CG48 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBCP0CG48 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.06■□□□□ 0.32
UBCP0CG48 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBCP0CG48 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.06■□□□□ 0.32
UBCP0CG48 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBCP0CG48 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.05■□□□□ 0.32
UBCP0CG48 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UBCP0CG48 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
UBCP0CG48 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
UBCP0CG48 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
UBCP0CG48 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.05■□□□□ 0.32
UBCP0CG48 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.05■□□□□ 0.32
UBCP0CG48 AC026271.2-201ENST00000428091 497 ntBASIC17.05■□□□□ 0.32
UBCP0CG48 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.05■□□□□ 0.32
UBCP0CG48 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBCP0CG48 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
UBCP0CG48 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.05■□□□□ 0.32
UBCP0CG48 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.05■□□□□ 0.32
UBCP0CG48 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBCP0CG48 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.04■□□□□ 0.32
UBCP0CG48 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.04■□□□□ 0.32
UBCP0CG48 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.04■□□□□ 0.32
UBCP0CG48 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.04■□□□□ 0.32
UBCP0CG48 GPX1P1-201ENST00000388829 606 ntBASIC17.04■□□□□ 0.32
UBCP0CG48 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.04■□□□□ 0.32
UBCP0CG48 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.04■□□□□ 0.32
UBCP0CG48 AC133552.2-202ENST00000575694 574 ntBASIC17.04■□□□□ 0.32
UBCP0CG48 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.04■□□□□ 0.32
UBCP0CG48 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.04■□□□□ 0.32
UBCP0CG48 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.04■□□□□ 0.32
UBCP0CG48 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBCP0CG48 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
UBCP0CG48 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBCP0CG48 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.03■□□□□ 0.32
UBCP0CG48 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBCP0CG48 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.03■□□□□ 0.32
UBCP0CG48 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBCP0CG48 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBCP0CG48 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBCP0CG48 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.03■□□□□ 0.32
UBCP0CG48 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.03■□□□□ 0.32
UBCP0CG48 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
UBCP0CG48 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBCP0CG48 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
UBCP0CG48 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.02■□□□□ 0.32
UBCP0CG48 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms