Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HOXC6P09630 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HOXC6P09630 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HOXC6P09630 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HOXC6P09630 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HOXC6P09630 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.03■■□□□ 1.12
HOXC6P09630 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
HOXC6P09630 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 KRT18P48-201ENST00000434763 852 ntBASIC22.03■■□□□ 1.12
HOXC6P09630 AL671277.2-201ENST00000458060 996 ntBASIC22.03■■□□□ 1.12
HOXC6P09630 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.03■■□□□ 1.12
HOXC6P09630 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.03■■□□□ 1.12
HOXC6P09630 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.03■■□□□ 1.12
HOXC6P09630 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
HOXC6P09630 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.03■■□□□ 1.12
HOXC6P09630 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 BX119927.1-201ENST00000636596 1552 ntBASIC22.03■■□□□ 1.12
HOXC6P09630 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HOXC6P09630 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.02■■□□□ 1.12
HOXC6P09630 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.02■■□□□ 1.12
HOXC6P09630 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HOXC6P09630 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HOXC6P09630 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
HOXC6P09630 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.02■■□□□ 1.12
HOXC6P09630 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HOXC6P09630 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.02■■□□□ 1.12
HOXC6P09630 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HOXC6P09630 PRSS44-201ENST00000515154 1146 ntBASIC22.02■■□□□ 1.12
HOXC6P09630 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.02■■□□□ 1.12
HOXC6P09630 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.02■■□□□ 1.12
HOXC6P09630 AC116407.4-201ENST00000623319 1061 ntBASIC22.02■■□□□ 1.12
HOXC6P09630 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HOXC6P09630 SMG8-203ENST00000578922 2178 ntBASIC22.02■■□□□ 1.12
HOXC6P09630 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.02■■□□□ 1.12
HOXC6P09630 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
HOXC6P09630 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
HOXC6P09630 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.01■■□□□ 1.11
HOXC6P09630 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.01■■□□□ 1.11
HOXC6P09630 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.01■■□□□ 1.11
HOXC6P09630 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.01■■□□□ 1.11
HOXC6P09630 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.01■■□□□ 1.11
HOXC6P09630 AC140113.3-201ENST00000605663 199 ntBASIC22.01■■□□□ 1.11
HOXC6P09630 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.01■■□□□ 1.11
HOXC6P09630 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.01■■□□□ 1.11
HOXC6P09630 AL023973.1-201ENST00000624619 620 ntBASIC22.01■■□□□ 1.11
HOXC6P09630 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HOXC6P09630 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.01■■□□□ 1.11
HOXC6P09630 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.01■■□□□ 1.11
HOXC6P09630 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.01■■□□□ 1.11
HOXC6P09630 KRT8P41-201ENST00000533985 1514 ntBASIC22.01■■□□□ 1.11
HOXC6P09630 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22■■□□□ 1.11
HOXC6P09630 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22■■□□□ 1.11
HOXC6P09630 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
HOXC6P09630 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
HOXC6P09630 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22■■□□□ 1.11
HOXC6P09630 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22■■□□□ 1.11
HOXC6P09630 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22■■□□□ 1.11
HOXC6P09630 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22■■□□□ 1.11
HOXC6P09630 AP003041.3-201ENST00000527151 707 ntBASIC22■■□□□ 1.11
HOXC6P09630 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 AC005332.1-201ENST00000577698 1310 ntBASIC22■■□□□ 1.11
HOXC6P09630 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22■■□□□ 1.11
HOXC6P09630 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
HOXC6P09630 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
HOXC6P09630 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
HOXC6P09630 AP001271.2-201ENST00000624018 1556 ntBASIC21.99■■□□□ 1.11
HOXC6P09630 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
HOXC6P09630 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms