Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 MIR663A-201ENST00000385250 93 ntBASIC17.48■□□□□ 0.39
HLA-DPB1P04440 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.48■□□□□ 0.39
HLA-DPB1P04440 PGM5P4-201ENST00000421970 445 ntBASIC17.48■□□□□ 0.39
HLA-DPB1P04440 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 AL162412.1-201ENST00000567129 965 ntBASIC17.48■□□□□ 0.39
HLA-DPB1P04440 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 RAP2CP1-201ENST00000605103 478 ntBASIC17.48■□□□□ 0.39
HLA-DPB1P04440 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 RARRES2P4-201ENST00000514074 484 ntBASIC17.47■□□□□ 0.39
HLA-DPB1P04440 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 AC069236.1-201ENST00000604339 616 ntBASIC17.47■□□□□ 0.39
HLA-DPB1P04440 AC008694.1-202ENST00000636953 945 ntBASIC17.47■□□□□ 0.39
HLA-DPB1P04440 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DPB1P04440 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 AP001271.2-201ENST00000624018 1556 ntBASIC17.46■□□□□ 0.39
HLA-DPB1P04440 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 CROCCP5-201ENST00000436658 830 ntBASIC17.46■□□□□ 0.39
HLA-DPB1P04440 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 CROCCP3-202ENST00000420820 1947 ntBASIC17.46■□□□□ 0.39
HLA-DPB1P04440 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DPB1P04440 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
HLA-DPB1P04440 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DPB1P04440 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms