Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.34■□□□□ 0.53
MT-ND1P03886 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.34■□□□□ 0.53
MT-ND1P03886 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MT-ND1P03886 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.34■□□□□ 0.53
MT-ND1P03886 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.34■□□□□ 0.53
MT-ND1P03886 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.34■□□□□ 0.53
MT-ND1P03886 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.34■□□□□ 0.53
MT-ND1P03886 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.34■□□□□ 0.53
MT-ND1P03886 AC137761.2-201ENST00000561729 223 ntBASIC18.34■□□□□ 0.53
MT-ND1P03886 AC145350.3-201ENST00000569033 163 ntBASIC18.34■□□□□ 0.53
MT-ND1P03886 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.34■□□□□ 0.53
MT-ND1P03886 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MT-ND1P03886 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
MT-ND1P03886 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.34■□□□□ 0.53
MT-ND1P03886 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND1P03886 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MT-ND1P03886 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND1P03886 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND1P03886 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND1P03886 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.33■□□□□ 0.53
MT-ND1P03886 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND1P03886 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND1P03886 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND1P03886 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND1P03886 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND1P03886 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND1P03886 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND1P03886 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND1P03886 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND1P03886 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.33■□□□□ 0.52
MT-ND1P03886 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.33■□□□□ 0.52
MT-ND1P03886 AL031963.3-201ENST00000606441 850 ntBASIC18.33■□□□□ 0.52
MT-ND1P03886 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.33■□□□□ 0.52
MT-ND1P03886 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.33■□□□□ 0.52
MT-ND1P03886 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND1P03886 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND1P03886 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MT-ND1P03886 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.33■□□□□ 0.52
MT-ND1P03886 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.33■□□□□ 0.52
MT-ND1P03886 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MT-ND1P03886 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND1P03886 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.33■□□□□ 0.52
MT-ND1P03886 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND1P03886 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MT-ND1P03886 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.32■□□□□ 0.52
MT-ND1P03886 KRT18P5-201ENST00000436075 1291 ntBASIC18.32■□□□□ 0.52
MT-ND1P03886 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.32■□□□□ 0.52
MT-ND1P03886 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.32■□□□□ 0.52
MT-ND1P03886 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MT-ND1P03886 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND1P03886 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MT-ND1P03886 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MT-ND1P03886 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 AC006333.2-201ENST00000607957 2099 ntBASIC18.31■□□□□ 0.52
MT-ND1P03886 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.31■□□□□ 0.52
MT-ND1P03886 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.31■□□□□ 0.52
MT-ND1P03886 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.31■□□□□ 0.52
MT-ND1P03886 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
MT-ND1P03886 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.31■□□□□ 0.52
MT-ND1P03886 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.31■□□□□ 0.52
MT-ND1P03886 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MT-ND1P03886 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND1P03886 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
MT-ND1P03886 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms