Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.71■■□□□ 1.07
PGK1P00558 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.7■■□□□ 1.07
PGK1P00558 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PGK1P00558 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PGK1P00558 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.7■■□□□ 1.06
PGK1P00558 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.7■■□□□ 1.06
PGK1P00558 CA15P1-201ENST00000481698 905 ntBASIC21.7■■□□□ 1.06
PGK1P00558 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.7■■□□□ 1.06
PGK1P00558 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.7■■□□□ 1.06
PGK1P00558 PRSS44-201ENST00000515154 1146 ntBASIC21.7■■□□□ 1.06
PGK1P00558 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.7■■□□□ 1.06
PGK1P00558 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.7■■□□□ 1.06
PGK1P00558 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.7■■□□□ 1.06
PGK1P00558 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.7■■□□□ 1.06
PGK1P00558 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PGK1P00558 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PGK1P00558 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGK1P00558 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.69■■□□□ 1.06
PGK1P00558 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.69■■□□□ 1.06
PGK1P00558 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PGK1P00558 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.69■■□□□ 1.06
PGK1P00558 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGK1P00558 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PGK1P00558 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PGK1P00558 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.69■■□□□ 1.06
PGK1P00558 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PGK1P00558 AC116407.4-201ENST00000623319 1061 ntBASIC21.69■■□□□ 1.06
PGK1P00558 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGK1P00558 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGK1P00558 KRT8P45-201ENST00000414328 1447 ntBASIC21.69■■□□□ 1.06
PGK1P00558 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PGK1P00558 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGK1P00558 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGK1P00558 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.68■■□□□ 1.06
PGK1P00558 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.68■■□□□ 1.06
PGK1P00558 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGK1P00558 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PGK1P00558 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.68■■□□□ 1.06
PGK1P00558 HCG4P8-203ENST00000443049 980 ntBASIC21.68■■□□□ 1.06
PGK1P00558 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.68■■□□□ 1.06
PGK1P00558 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.68■■□□□ 1.06
PGK1P00558 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PGK1P00558 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.68■■□□□ 1.06
PGK1P00558 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PGK1P00558 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGK1P00558 BX119927.1-201ENST00000636596 1552 ntBASIC21.68■■□□□ 1.06
PGK1P00558 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PGK1P00558 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGK1P00558 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGK1P00558 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGK1P00558 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PGK1P00558 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.67■■□□□ 1.06
PGK1P00558 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PGK1P00558 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGK1P00558 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.67■■□□□ 1.06
PGK1P00558 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.67■■□□□ 1.06
PGK1P00558 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGK1P00558 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGK1P00558 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PGK1P00558 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.67■■□□□ 1.06
PGK1P00558 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PGK1P00558 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PGK1P00558 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.67■■□□□ 1.06
PGK1P00558 CKBP1-201ENST00000565489 1086 ntBASIC21.67■■□□□ 1.06
PGK1P00558 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.67■■□□□ 1.06
PGK1P00558 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.67■■□□□ 1.06
PGK1P00558 AC008622.2-201ENST00000617006 1229 ntBASIC21.67■■□□□ 1.06
PGK1P00558 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PGK1P00558 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.67■■□□□ 1.06
PGK1P00558 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.67■■□□□ 1.06
PGK1P00558 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.66■■□□□ 1.06
PGK1P00558 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
PGK1P00558 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PGK1P00558 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PGK1P00558 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PGK1P00558 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PGK1P00558 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PGK1P00558 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.66■■□□□ 1.06
PGK1P00558 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PGK1P00558 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PGK1P00558 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PGK1P00558 AL450487.1-201ENST00000426799 995 ntBASIC21.66■■□□□ 1.06
PGK1P00558 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PGK1P00558 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms