Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.29■□□□□ 0.36
CNOT4O95628 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CNOT4O95628 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.29■□□□□ 0.36
CNOT4O95628 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.29■□□□□ 0.36
CNOT4O95628 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 AF186192.3-201ENST00000583427 947 ntBASIC17.29■□□□□ 0.36
CNOT4O95628 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.29■□□□□ 0.36
CNOT4O95628 AL049637.2-201ENST00000641778 930 ntBASIC17.29■□□□□ 0.36
CNOT4O95628 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CNOT4O95628 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
CNOT4O95628 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CNOT4O95628 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT4O95628 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT4O95628 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.28■□□□□ 0.36
CNOT4O95628 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT4O95628 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT4O95628 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CNOT4O95628 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.28■□□□□ 0.36
CNOT4O95628 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.28■□□□□ 0.36
CNOT4O95628 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT4O95628 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT4O95628 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.28■□□□□ 0.36
CNOT4O95628 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT4O95628 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT4O95628 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT4O95628 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.28■□□□□ 0.36
CNOT4O95628 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.28■□□□□ 0.36
CNOT4O95628 C1QL1P1-201ENST00000568105 661 ntBASIC17.28■□□□□ 0.36
CNOT4O95628 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.28■□□□□ 0.36
CNOT4O95628 AC073195.1-201ENST00000607241 877 ntBASIC17.28■□□□□ 0.36
CNOT4O95628 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.28■□□□□ 0.36
CNOT4O95628 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT4O95628 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT4O95628 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT4O95628 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNOT4O95628 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT4O95628 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CNOT4O95628 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT4O95628 AL391422.3-201ENST00000603791 2761 ntBASIC17.28■□□□□ 0.36
CNOT4O95628 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT4O95628 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT4O95628 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT4O95628 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT4O95628 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CNOT4O95628 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNOT4O95628 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT4O95628 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CNOT4O95628 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT4O95628 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 TSPY7P-201ENST00000431358 1114 ntBASIC17.27■□□□□ 0.36
CNOT4O95628 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT4O95628 AP002982.1-201ENST00000492365 877 ntBASIC17.27■□□□□ 0.36
CNOT4O95628 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.27■□□□□ 0.36
CNOT4O95628 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.27■□□□□ 0.36
CNOT4O95628 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT4O95628 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CNOT4O95628 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT4O95628 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT4O95628 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.27■□□□□ 0.35
CNOT4O95628 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT4O95628 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT4O95628 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT4O95628 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.27■□□□□ 0.35
CNOT4O95628 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT4O95628 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT4O95628 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT4O95628 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT4O95628 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT4O95628 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT4O95628 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT4O95628 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
CNOT4O95628 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.26■□□□□ 0.35
CNOT4O95628 LINC01006-201ENST00000333319 2292 ntBASIC17.26■□□□□ 0.35
CNOT4O95628 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.26■□□□□ 0.35
CNOT4O95628 TMEM179-206ENST00000616017 1645 ntBASIC17.26■□□□□ 0.35
CNOT4O95628 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT4O95628 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT4O95628 KSR1P1-201ENST00000446298 240 ntBASIC17.26■□□□□ 0.35
CNOT4O95628 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.26■□□□□ 0.35
CNOT4O95628 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.26■□□□□ 0.35
CNOT4O95628 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms