Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.02■□□□□ 0.64
SIX3O95343 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.02■□□□□ 0.64
SIX3O95343 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.02■□□□□ 0.64
SIX3O95343 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIX3O95343 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.02■□□□□ 0.64
SIX3O95343 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SIX3O95343 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SIX3O95343 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.02■□□□□ 0.63
SIX3O95343 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.02■□□□□ 0.63
SIX3O95343 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.01■□□□□ 0.63
SIX3O95343 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SIX3O95343 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX3O95343 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX3O95343 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX3O95343 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.01■□□□□ 0.63
SIX3O95343 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.01■□□□□ 0.63
SIX3O95343 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.01■□□□□ 0.63
SIX3O95343 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SIX3O95343 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.01■□□□□ 0.63
SIX3O95343 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.01■□□□□ 0.63
SIX3O95343 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.01■□□□□ 0.63
SIX3O95343 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.01■□□□□ 0.63
SIX3O95343 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.01■□□□□ 0.63
SIX3O95343 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.01■□□□□ 0.63
SIX3O95343 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SIX3O95343 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX3O95343 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX3O95343 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.01■□□□□ 0.63
SIX3O95343 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIX3O95343 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX3O95343 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX3O95343 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX3O95343 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
SIX3O95343 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19■□□□□ 0.63
SIX3O95343 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SIX3O95343 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19■□□□□ 0.63
SIX3O95343 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19■□□□□ 0.63
SIX3O95343 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19■□□□□ 0.63
SIX3O95343 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19■□□□□ 0.63
SIX3O95343 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19■□□□□ 0.63
SIX3O95343 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19■□□□□ 0.63
SIX3O95343 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19■□□□□ 0.63
SIX3O95343 AC083880.1-201ENST00000608266 535 ntBASIC19■□□□□ 0.63
SIX3O95343 HLA-B-256ENST00000639848 1089 ntBASIC19■□□□□ 0.63
SIX3O95343 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19■□□□□ 0.63
SIX3O95343 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SIX3O95343 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19■□□□□ 0.63
SIX3O95343 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19■□□□□ 0.63
SIX3O95343 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19■□□□□ 0.63
SIX3O95343 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19■□□□□ 0.63
SIX3O95343 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX3O95343 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19■□□□□ 0.63
SIX3O95343 AL049812.1-201ENST00000432563 2267 ntBASIC18.99■□□□□ 0.63
SIX3O95343 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.99■□□□□ 0.63
SIX3O95343 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SIX3O95343 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 TEX21P-204ENST00000641479 1693 ntBASIC18.99■□□□□ 0.63
SIX3O95343 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.99■□□□□ 0.63
SIX3O95343 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.99■□□□□ 0.63
SIX3O95343 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.99■□□□□ 0.63
SIX3O95343 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.99■□□□□ 0.63
SIX3O95343 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.99■□□□□ 0.63
SIX3O95343 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.99■□□□□ 0.63
SIX3O95343 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 ZNF815P-204ENST00000434898 1737 ntBASIC18.99■□□□□ 0.63
SIX3O95343 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SIX3O95343 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
SIX3O95343 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX3O95343 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.98■□□□□ 0.63
SIX3O95343 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.98■□□□□ 0.63
SIX3O95343 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX3O95343 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIX3O95343 AL161938.1-201ENST00000569833 2180 ntBASIC18.98■□□□□ 0.63
SIX3O95343 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms