Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 AL513477.1-201ENST00000602865 2407 ntBASIC13.12□□□□□ -0.31
SNCGO76070 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 AP004607.7-201ENST00000527152 1677 ntBASIC13.12□□□□□ -0.31
SNCGO76070 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SNCGO76070 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.12□□□□□ -0.31
SNCGO76070 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SNCGO76070 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SNCGO76070 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.12□□□□□ -0.31
SNCGO76070 AC005332.7-201ENST00000614046 2005 ntBASIC13.12□□□□□ -0.31
SNCGO76070 TK2-202ENST00000417693 1046 ntTSL 2 BASIC13.12□□□□□ -0.31
SNCGO76070 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SNCGO76070 AL031602.1-201ENST00000633169 911 ntBASIC13.12□□□□□ -0.31
SNCGO76070 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.12□□□□□ -0.31
SNCGO76070 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SNCGO76070 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SNCGO76070 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.12□□□□□ -0.31
SNCGO76070 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.12□□□□□ -0.31
SNCGO76070 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCGO76070 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SNCGO76070 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
SNCGO76070 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.11□□□□□ -0.31
SNCGO76070 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 AL391005.1-201ENST00000623953 2435 ntBASIC13.11□□□□□ -0.31
SNCGO76070 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SNCGO76070 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 AC067930.6-201ENST00000623257 4947 ntBASIC13.11□□□□□ -0.31
SNCGO76070 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.11□□□□□ -0.31
SNCGO76070 FP700111.2-201ENST00000619190 1892 ntBASIC13.11□□□□□ -0.31
SNCGO76070 BHLHE23-202ENST00000612929 1109 ntBASIC13.11□□□□□ -0.31
SNCGO76070 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.11□□□□□ -0.31
SNCGO76070 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNCGO76070 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.11□□□□□ -0.31
SNCGO76070 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCGO76070 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.11□□□□□ -0.31
SNCGO76070 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
SNCGO76070 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 AL162377.1-201ENST00000618844 1793 ntBASIC13.1□□□□□ -0.31
SNCGO76070 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SNCGO76070 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.1□□□□□ -0.31
SNCGO76070 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC13.1□□□□□ -0.31
SNCGO76070 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 AL499627.2-201ENST00000606283 725 ntBASIC13.1□□□□□ -0.31
SNCGO76070 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.1□□□□□ -0.31
SNCGO76070 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SNCGO76070 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.1□□□□□ -0.31
SNCGO76070 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCGO76070 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNCGO76070 AC099778.1-201ENST00000568593 1911 ntBASIC13.09□□□□□ -0.31
SNCGO76070 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNCGO76070 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms