Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 SOD2-208ENST00000535459 581 ntTSL 213.69□□□□□ -0.223e-7■□□□□ 10.7
DKC1O60832 SOD2-214ENST00000545162 571 ntTSL 313.52□□□□□ -0.253e-7■□□□□ 10.7
DKC1O60832 G2E3-210ENST00000552488 786 ntTSL 313.15□□□□□ -0.33e-7■□□□□ 10.7
DKC1O60832 MBD5-223ENST00000637308 1072 ntTSL 512.95□□□□□ -0.341e-5■□□□□ 10.7
DKC1O60832 CCNC-218ENST00000524049 759 ntTSL 512.95□□□□□ -0.341e-5■□□□□ 10.7
DKC1O60832 MDH2-201ENST00000315758 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.361e-5■□□□□ 10.7
DKC1O60832 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.372e-12■□□□□ 10.7
DKC1O60832 MBD5-233ENST00000638130 1034 ntTSL 512.71□□□□□ -0.371e-5■□□□□ 10.7
DKC1O60832 PHF21A-202ENST00000418153 2730 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.391e-5■□□□□ 10.7
DKC1O60832 WDR20-220ENST00000561154 541 ntTSL 412.27□□□□□ -0.451e-5■□□□□ 10.7
DKC1O60832 HINT1-208ENST00000513012 583 ntTSL 4 BASIC12.24□□□□□ -0.451e-5■□□□□ 10.7
DKC1O60832 SORBS3-209ENST00000520563 456 ntTSL 412.13□□□□□ -0.472e-12■□□□□ 10.7
DKC1O60832 WDR20-216ENST00000558567 586 ntTSL 5 BASIC12.07□□□□□ -0.481e-5■□□□□ 10.7
DKC1O60832 WDR20-210ENST00000556511 2117 ntTSL 1 (best) BASIC11.98□□□□□ -0.491e-5■□□□□ 10.7
DKC1O60832 MBD5-206ENST00000473478 484 ntTSL 411.93□□□□□ -0.51e-5■□□□□ 10.7
DKC1O60832 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.51e-5■□□□□ 10.7
DKC1O60832 SORBS3-222ENST00000524057 564 ntTSL 311.85□□□□□ -0.512e-12■□□□□ 10.7
DKC1O60832 SOD2-210ENST00000537657 507 ntTSL 211.78□□□□□ -0.523e-7■□□□□ 10.7
DKC1O60832 CCNC-203ENST00000369220 2118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.571e-5■□□□□ 10.7
DKC1O60832 LDLR-214ENST00000560628 535 ntTSL 311.44□□□□□ -0.581e-5■□□□□ 10.7
DKC1O60832 WDR20-207ENST00000555879 2175 ntTSL 211.34□□□□□ -0.591e-5■□□□□ 10.7
DKC1O60832 WDR20-204ENST00000342702 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.611e-5■□□□□ 10.7
DKC1O60832 HINT1-207ENST00000511475 923 ntTSL 311.23□□□□□ -0.611e-5■□□□□ 10.7
DKC1O60832 CCNC-205ENST00000484049 1412 ntTSL 510.93□□□□□ -0.661e-5■□□□□ 10.7
DKC1O60832 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC10.14□□□□□ -0.791e-5■□□□□ 10.7
DKC1O60832 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC10.02□□□□□ -0.81e-5■□□□□ 10.7
DKC1O60832 RELN-206ENST00000473945 688 ntTSL 39.97□□□□□ -0.813e-7■□□□□ 10.7
DKC1O60832 WDR20-212ENST00000557186 631 ntTSL 39.88□□□□□ -0.831e-5■□□□□ 10.7
DKC1O60832 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.83□□□□□ -0.844e-9■□□□□ 10.7
DKC1O60832 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.864e-9■□□□□ 10.7
DKC1O60832 MBD5-205ENST00000470063 324 ntTSL 39.58□□□□□ -0.881e-5■□□□□ 10.7
DKC1O60832 MBD5-225ENST00000637445 958 ntTSL 59.58□□□□□ -0.881e-5■□□□□ 10.7
DKC1O60832 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC9.22□□□□□ -0.931e-5■□□□□ 10.7
DKC1O60832 CCNC-201ENST00000326298 2212 ntTSL 1 (best)9.02□□□□□ -0.971e-5■□□□□ 10.7
DKC1O60832 MBD5-230ENST00000637997 1602 ntTSL 58.88□□□□□ -0.991e-5■□□□□ 10.7
DKC1O60832 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.78□□□□□ -11e-5■□□□□ 10.7
DKC1O60832 PHF21A-218ENST00000532883 1051 ntTSL 58.07□□□□□ -1.121e-5■□□□□ 10.7
DKC1O60832 MBD5-232ENST00000638090 2039 ntTSL 57.06□□□□□ -1.281e-5■□□□□ 10.7
DKC1O60832 HINT1-203ENST00000506207 369 ntTSL 56.21□□□□□ -1.421e-5■□□□□ 10.7
DKC1O60832 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.421e-5■□□□□ 10.7
DKC1O60832 SOD2-213ENST00000541573 573 ntTSL 46.08□□□□□ -1.443e-7■□□□□ 10.7
DKC1O60832 CCNC-206ENST00000486428 849 ntTSL 36.05□□□□□ -1.441e-5■□□□□ 10.7
DKC1O60832 RELN-204ENST00000429186 891 ntTSL 55.1□□□□□ -1.593e-7■□□□□ 10.7
DKC1O60832 MBD5-216ENST00000635796 1371 ntTSL 54.94□□□□□ -1.621e-5■□□□□ 10.7
DKC1O60832 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.66□□□□□ -1.661e-5■□□□□ 10.7
DKC1O60832 HINT1-202ENST00000504202 619 ntTSL 53.97□□□□□ -1.771e-5■□□□□ 10.7
DKC1O60832 RALGAPA1-208ENST00000554573 2358 ntTSL 53.84□□□□□ -1.791e-5■□□□□ 10.7
DKC1O60832 PHF21A-203ENST00000524497 555 ntTSL 52.8□□□□□ -1.961e-5■□□□□ 10.7
DKC1O60832 MBD5-210ENST00000496158 544 ntTSL 52.76□□□□□ -1.971e-5■□□□□ 10.7
DKC1O60832 MBD5-209ENST00000488372 548 ntTSL 42.63□□□□□ -1.991e-5■□□□□ 10.7
DKC1O60832 RALGAPA1-206ENST00000554259 3354 ntTSL 52.44□□□□□ -2.021e-5■□□□□ 10.7
DKC1O60832 CCNC-208ENST00000519617 246 ntTSL 32.04□□□□□ -2.081e-5■□□□□ 10.7
DKC1O60832 AFF1-207ENST00000511442 463 ntTSL 32.02□□□□□ -2.091e-5■□□□□ 10.7
DKC1O60832 G2E3-209ENST00000550944 565 ntTSL 21.47□□□□□ -2.173e-7■□□□□ 10.7
DKC1O60832 SNORD56-201ENST00000413522 71 ntBASIC2.42□□□□□ -2.021e-323■□□□□ 10.7
DKC1O60832 PPAN-206ENST00000466025 523 ntTSL 220.22■□□□□ 0.833e-21■□□□□ 10.7
DKC1O60832 SNORD105B-201ENST00000458770 79 ntBASIC4.14□□□□□ -1.753e-21■□□□□ 10.7
DKC1O60832 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.867e-16■□□□□ 10.7
DKC1O60832 RPL3-203ENST00000402527 1205 ntTSL 520.38■□□□□ 0.857e-16■□□□□ 10.7
DKC1O60832 RPL3-211ENST00000465618 2108 ntTSL 1 (best)16.12■□□□□ 0.177e-16■□□□□ 10.7
DKC1O60832 RPL3-206ENST00000453303 916 ntTSL 515.15■□□□□ 0.027e-16■□□□□ 10.7
DKC1O60832 SNHG16-205ENST00000587743 2665 nt16.59■□□□□ 0.259e-13■□□□□ 10.6
DKC1O60832 RN7SL749P-201ENST00000460421 290 ntBASIC9.97□□□□□ -0.812e-13■□□□□ 10.5
DKC1O60832 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.7■■■□□ 2.033e-21■□□□□ 10.4
DKC1O60832 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.623e-21■□□□□ 10.4
DKC1O60832 PPAN-205ENST00000446223 844 ntTSL 320.46■□□□□ 0.873e-21■□□□□ 10.4
DKC1O60832 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.663e-21■□□□□ 10.4
DKC1O60832 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.9■□□□□ 0.463e-21■□□□□ 10.4
DKC1O60832 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.19■□□□□ 0.823e-10■□□□□ 10.4
DKC1O60832 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.023e-10■□□□□ 10.4
DKC1O60832 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.173e-10■□□□□ 10.4
DKC1O60832 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.253e-10■□□□□ 10.4
DKC1O60832 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.293e-10■□□□□ 10.4
DKC1O60832 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.26□□□□□ -0.933e-10■□□□□ 10.4
DKC1O60832 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.133e-10■□□□□ 10.4
DKC1O60832 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.79□□□□□ -1.163e-10■□□□□ 10.4
DKC1O60832 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.223e-10■□□□□ 10.4
DKC1O60832 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.05■■□□□ 1.442e-23■□□□□ 10.4
DKC1O60832 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC8.79□□□□□ -12e-23■□□□□ 10.4
DKC1O60832 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.372e-24■□□□□ 10.4
DKC1O60832 AMBP-204ENST00000603230 1057 ntTSL 1 (best)17.24■□□□□ 0.352e-24■□□□□ 10.4
DKC1O60832 AMBP-203ENST00000540645 1356 ntTSL 214.26□□□□□ -0.132e-24■□□□□ 10.4
DKC1O60832 AMBP-202ENST00000466610 579 ntTSL 311.38□□□□□ -0.592e-24■□□□□ 10.4
DKC1O60832 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.99■■□□□ 1.111e-61■□□□□ 10.4
DKC1O60832 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.611e-61■□□□□ 10.4
DKC1O60832 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.29■□□□□ 0.041e-61■□□□□ 10.4
DKC1O60832 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC13.91□□□□□ -0.181e-61■□□□□ 10.4
DKC1O60832 HSPA8-203ENST00000524552 963 ntTSL 1 (best)13.67□□□□□ -0.221e-61■□□□□ 10.4
DKC1O60832 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.31e-61■□□□□ 10.4
DKC1O60832 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC13.16□□□□□ -0.31e-61■□□□□ 10.4
DKC1O60832 HSPA8-215ENST00000532091 2301 ntTSL 511.82□□□□□ -0.521e-61■□□□□ 10.4
DKC1O60832 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.641e-61■□□□□ 10.4
DKC1O60832 HSPA8-208ENST00000526686 740 ntTSL 1 (best)4.05□□□□□ -1.761e-61■□□□□ 10.4
DKC1O60832 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.461e-8■□□□□ 10.3
DKC1O60832 MAP4-212ENST00000468075 487 ntTSL 517.25■□□□□ 0.351e-8■□□□□ 10.3
DKC1O60832 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.011e-8■□□□□ 10.3
DKC1O60832 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.741e-8■□□□□ 10.3
DKC1O60832 MAP4-206ENST00000423088 899 ntTSL 310.05□□□□□ -0.81e-8■□□□□ 10.3
DKC1O60832 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.87□□□□□ -0.991e-8■□□□□ 10.3
DKC1O60832 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.44□□□□□ -0.18e-22■□□□□ 10.3
Retrieved 100 of 8,567 protein–RNA pairs in 53.8 ms