RNA–Protein interactions for RNA: ENST00000486428.6

CCNC-206, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-206ENST00000486428 AEBP2Q6ZN18 517 aaPredicted RBP27.9■■■□□ 2.06
CCNC-206ENST00000486428 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
CCNC-206ENST00000486428 SENP3Q9H4L4 574 aaPredicted RBP24.07■■□□□ 1.44
CCNC-206ENST00000486428 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
CCNC-206ENST00000486428 FOXD1Q16676 465 aa22.24■■□□□ 1.15
CCNC-206ENST00000486428 PLPPR3Q6T4P5 718 aa21.49■■□□□ 1.03
CCNC-206ENST00000486428 MSH5O43196 834 aa21.01■□□□□ 0.95
CCNC-206ENST00000486428 PIAS4Q8N2W9 510 aaPredicted RBP20.92■□□□□ 0.94
CCNC-206ENST00000486428 ADRA2BP18089 450 aa20.74■□□□□ 0.91
CCNC-206ENST00000486428 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
CCNC-206ENST00000486428 POTEDQ86YR6 584 aa20.2■□□□□ 0.82
CCNC-206ENST00000486428 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
CCNC-206ENST00000486428 DMRT2Q9Y5R5 561 aa19.02■□□□□ 0.64
CCNC-206ENST00000486428 MAPK8IP2Q13387 824 aaPredicted RBP18.97■□□□□ 0.63
CCNC-206ENST00000486428 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
CCNC-206ENST00000486428 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
CCNC-206ENST00000486428 HOXD11P31277 338 aaPredicted RBP18.33■□□□□ 0.52
CCNC-206ENST00000486428 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
CCNC-206ENST00000486428 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
CCNC-206ENST00000486428 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
CCNC-206ENST00000486428 CACNB1Q02641 598 aaPredicted RBP17.93■□□□□ 0.46
CCNC-206ENST00000486428 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
CCNC-206ENST00000486428 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
CCNC-206ENST00000486428 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
CCNC-206ENST00000486428 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
CCNC-206ENST00000486428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCNC-206ENST00000486428 KCNA4P22459 653 aa17.43■□□□□ 0.38
CCNC-206ENST00000486428 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
CCNC-206ENST00000486428 APLP2Q06481 763 aa16.94■□□□□ 0.3
CCNC-206ENST00000486428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
CCNC-206ENST00000486428 CAPN15O75808 1086 aa16.88■□□□□ 0.29
CCNC-206ENST00000486428 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
CCNC-206ENST00000486428 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
CCNC-206ENST00000486428 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
CCNC-206ENST00000486428 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
CCNC-206ENST00000486428 ZNF219Q9P2Y4 722 aaPredicted RBP16.68■□□□□ 0.26
CCNC-206ENST00000486428 DSG3P32926 999 aa16.67■□□□□ 0.26
CCNC-206ENST00000486428 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
CCNC-206ENST00000486428 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.24
CCNC-206ENST00000486428 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
CCNC-206ENST00000486428 ABCB7O75027 752 aa16.4■□□□□ 0.22
CCNC-206ENST00000486428 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
CCNC-206ENST00000486428 POLA2Q14181 598 aa16.13■□□□□ 0.17
CCNC-206ENST00000486428 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
CCNC-206ENST00000486428 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
CCNC-206ENST00000486428 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
CCNC-206ENST00000486428 ZBTB22O15209 634 aa15.92■□□□□ 0.14
CCNC-206ENST00000486428 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
CCNC-206ENST00000486428 POTEHQ6S545 545 aa15.91■□□□□ 0.14
CCNC-206ENST00000486428 AKT1S1Q96B36 256 aa15.68■□□□□ 0.1
CCNC-206ENST00000486428 FBLN2P98095 1184 aa15.62■□□□□ 0.09
CCNC-206ENST00000486428 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
CCNC-206ENST00000486428 CHRDL2Q6WN34 429 aa15.59■□□□□ 0.09
CCNC-206ENST00000486428 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
CCNC-206ENST00000486428 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
CCNC-206ENST00000486428 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
CCNC-206ENST00000486428 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
CCNC-206ENST00000486428 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
CCNC-206ENST00000486428 PITPNM1O00562 1244 aa15.25■□□□□ 0.03
CCNC-206ENST00000486428 EHMT2Q96KQ7 1210 aa15.23■□□□□ 0.03
CCNC-206ENST00000486428 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
CCNC-206ENST00000486428 ZNF692Q9BU19 519 aaPredicted RBP15.22■□□□□ 0.03
CCNC-206ENST00000486428 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
CCNC-206ENST00000486428 SPDYE1Q8NFV5 336 aaPredicted RBP15.17■□□□□ 0.02
CCNC-206ENST00000486428 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
CCNC-206ENST00000486428 FXR2P51116 673 aaKnown RBP eCLIP15.12■□□□□ 0.01
CCNC-206ENST00000486428 CLEC11AQ9Y240 323 aa15.09■□□□□ 0.01
CCNC-206ENST00000486428 HAX1O00165 279 aa14.97□□□□□ -0.01
CCNC-206ENST00000486428 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
CCNC-206ENST00000486428 SP7Q8TDD2 431 aaPredicted RBP14.96□□□□□ -0.01
CCNC-206ENST00000486428 PRKAR2AP13861 404 aaKnown RBP14.91□□□□□ -0.02
CCNC-206ENST00000486428 PRR29P0C7W0 189 aa14.87□□□□□ -0.03
CCNC-206ENST00000486428 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
CCNC-206ENST00000486428 SPDYE4A6NLX3 237 aa14.7□□□□□ -0.06
CCNC-206ENST00000486428 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
CCNC-206ENST00000486428 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
CCNC-206ENST00000486428 EVX2Q03828 476 aa14.55□□□□□ -0.08
CCNC-206ENST00000486428 FARP1Q9Y4F1 1045 aaPredicted RBP14.54□□□□□ -0.08
CCNC-206ENST00000486428 CD44P16070 742 aaKnown RBP14.46□□□□□ -0.09
CCNC-206ENST00000486428 CLCN6P51797 869 aa14.45□□□□□ -0.1
CCNC-206ENST00000486428 GABBR2O75899 941 aa14.39□□□□□ -0.11
CCNC-206ENST00000486428 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
CCNC-206ENST00000486428 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
CCNC-206ENST00000486428 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCNC-206ENST00000486428 PROM2Q8N271 834 aa14.27□□□□□ -0.13
CCNC-206ENST00000486428 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.13
CCNC-206ENST00000486428 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
CCNC-206ENST00000486428 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
CCNC-206ENST00000486428 DCBLD2Q96PD2 775 aa14.16□□□□□ -0.14
CCNC-206ENST00000486428 MNX1P50219 401 aaPredicted RBP14.1□□□□□ -0.15
CCNC-206ENST00000486428 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
CCNC-206ENST00000486428 MIER1Q8N108 512 aa14.05□□□□□ -0.16
CCNC-206ENST00000486428 LHX8Q68G74 356 aa14.03□□□□□ -0.16
CCNC-206ENST00000486428 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
CCNC-206ENST00000486428 FKBP8Q14318 412 aa14□□□□□ -0.17
CCNC-206ENST00000486428 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
CCNC-206ENST00000486428 PHF12Q96QT6 1004 aa13.98□□□□□ -0.17
CCNC-206ENST00000486428 GALR2O43603 387 aaPredicted RBP13.97□□□□□ -0.17
CCNC-206ENST00000486428 POTEIP0CG38 1075 aa13.96□□□□□ -0.17
CCNC-206ENST00000486428 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms