RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 AEBP2Q6ZN18 517 aaPredicted RBP14.81□□□□□ -0.04
CCNC-208ENST00000519617 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
CCNC-208ENST00000519617 SENP3Q9H4L4 574 aaPredicted RBP12.64□□□□□ -0.39
CCNC-208ENST00000519617 PHF23Q9BUL5 403 aaPredicted RBP12.48□□□□□ -0.41
CCNC-208ENST00000519617 FOXD1Q16676 465 aa11.79□□□□□ -0.52
CCNC-208ENST00000519617 POTEDQ86YR6 584 aa11.27□□□□□ -0.61
CCNC-208ENST00000519617 PLPPR3Q6T4P5 718 aa11.19□□□□□ -0.62
CCNC-208ENST00000519617 MSH5O43196 834 aa11.05□□□□□ -0.64
CCNC-208ENST00000519617 PPP6R1Q9UPN7 881 aa10.99□□□□□ -0.65
CCNC-208ENST00000519617 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
CCNC-208ENST00000519617 ADRA2BP18089 450 aa10.94□□□□□ -0.66
CCNC-208ENST00000519617 MAPK8IP2Q13387 824 aaPredicted RBP10.06□□□□□ -0.8
CCNC-208ENST00000519617 SCAF1Q9H7N4 1312 aaKnown RBP10.04□□□□□ -0.8
CCNC-208ENST00000519617 DMRT2Q9Y5R5 561 aa10.02□□□□□ -0.81
CCNC-208ENST00000519617 PPP4R3CPQ6ZMV5 832 aa9.8□□□□□ -0.84
CCNC-208ENST00000519617 HOXD11P31277 338 aaPredicted RBP9.66□□□□□ -0.86
CCNC-208ENST00000519617 CNKSR2Q8WXI2 1034 aa9.63□□□□□ -0.87
CCNC-208ENST00000519617 DCAF8L1A6NGE4 600 aa9.56□□□□□ -0.88
CCNC-208ENST00000519617 RNF216Q9NWF9 866 aaPredicted RBP9.56□□□□□ -0.88
CCNC-208ENST00000519617 CACNB1Q02641 598 aaPredicted RBP9.49□□□□□ -0.89
CCNC-208ENST00000519617 RNF39Q9H2S5 420 aa9.43□□□□□ -0.9
CCNC-208ENST00000519617 NCBP3Q53F19 620 aaKnown RBP9.42□□□□□ -0.9
CCNC-208ENST00000519617 DNAJC5BQ9UF47 199 aa9.36□□□□□ -0.91
CCNC-208ENST00000519617 C1QBPQ07021 282 aaKnown RBP9.3□□□□□ -0.92
CCNC-208ENST00000519617 NPM3O75607 178 aaKnown RBP9.26□□□□□ -0.93
CCNC-208ENST00000519617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.16□□□□□ -0.94
CCNC-208ENST00000519617 KCNA4P22459 653 aa9.04□□□□□ -0.96
CCNC-208ENST00000519617 U3KPZ7 1027 aaPredicted RBP8.97□□□□□ -0.97
CCNC-208ENST00000519617 SLC4A2P04920 1241 aa8.87□□□□□ -0.99
CCNC-208ENST00000519617 SPINK5Q9NQ38 1064 aaPredicted RBP8.85□□□□□ -0.99
CCNC-208ENST00000519617 CAPN15O75808 1086 aa8.82□□□□□ -1
CCNC-208ENST00000519617 DSG3P32926 999 aa8.81□□□□□ -1
CCNC-208ENST00000519617 APLP2Q06481 763 aa8.73□□□□□ -1.01
CCNC-208ENST00000519617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.72□□□□□ -1.01
CCNC-208ENST00000519617 HNRNPUL2Q1KMD3 747 aaKnown RBP8.72□□□□□ -1.01
CCNC-208ENST00000519617 ZNF219Q9P2Y4 722 aaPredicted RBP8.68□□□□□ -1.02
CCNC-208ENST00000519617 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
CCNC-208ENST00000519617 SAMD1Q6SPF0 538 aaPredicted RBP8.66□□□□□ -1.02
CCNC-208ENST00000519617 POTEHQ6S545 545 aa8.65□□□□□ -1.02
CCNC-208ENST00000519617 ABCB7O75027 752 aa8.61□□□□□ -1.03
CCNC-208ENST00000519617 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
CCNC-208ENST00000519617 SLC4A1APQ9BWU0 796 aaKnown RBP8.52□□□□□ -1.05
CCNC-208ENST00000519617 FOXD4L1Q9NU39 408 aa8.46□□□□□ -1.06
CCNC-208ENST00000519617 POLA2Q14181 598 aa8.44□□□□□ -1.06
CCNC-208ENST00000519617 RBM42Q9BTD8 480 aaKnown RBP8.41□□□□□ -1.06
CCNC-208ENST00000519617 ATF5Q9Y2D1 282 aaPredicted RBP8.37□□□□□ -1.07
CCNC-208ENST00000519617 ZBTB22O15209 634 aa8.31□□□□□ -1.08
CCNC-208ENST00000519617 ZBTB12Q9Y330 459 aaPredicted RBP8.28□□□□□ -1.08
CCNC-208ENST00000519617 ATXN8OSP0DMR3 200 aa8.24□□□□□ -1.09
CCNC-208ENST00000519617 CHRDL2Q6WN34 429 aa8.23□□□□□ -1.09
CCNC-208ENST00000519617 AKT1S1Q96B36 256 aa8.21□□□□□ -1.1
CCNC-208ENST00000519617 OSCARQ8IYS5 282 aa8.15□□□□□ -1.1
CCNC-208ENST00000519617 REM2Q8IYK8 340 aaPredicted RBP8.13□□□□□ -1.11
CCNC-208ENST00000519617 FBLN2P98095 1184 aa8.05□□□□□ -1.12
CCNC-208ENST00000519617 SPDYE2BA6NHP3 402 aa8.03□□□□□ -1.12
CCNC-208ENST00000519617 PITPNM1O00562 1244 aa8.03□□□□□ -1.12
CCNC-208ENST00000519617 SPDYE6P0CI01 402 aa8.03□□□□□ -1.12
CCNC-208ENST00000519617 SPDYE2Q495Y8 402 aa8.03□□□□□ -1.12
CCNC-208ENST00000519617 PIP4P2Q8N4L2 257 aa8.03□□□□□ -1.12
CCNC-208ENST00000519617 FXR2P51116 673 aaKnown RBP eCLIP7.99□□□□□ -1.13
CCNC-208ENST00000519617 MKRN4PQ13434 485 aaPredicted RBP7.99□□□□□ -1.13
CCNC-208ENST00000519617 SP7Q8TDD2 431 aaPredicted RBP7.94□□□□□ -1.14
CCNC-208ENST00000519617 SSUH2Q9Y2M2 353 aa7.92□□□□□ -1.14
CCNC-208ENST00000519617 ZNF692Q9BU19 519 aaPredicted RBP7.91□□□□□ -1.14
CCNC-208ENST00000519617 CSRNP3Q8WYN3 585 aa7.9□□□□□ -1.14
CCNC-208ENST00000519617 HAX1O00165 279 aa7.89□□□□□ -1.15
CCNC-208ENST00000519617 SPDYE1Q8NFV5 336 aaPredicted RBP7.89□□□□□ -1.15
CCNC-208ENST00000519617 CLEC11AQ9Y240 323 aa7.85□□□□□ -1.15
CCNC-208ENST00000519617 PRKAR2AP13861 404 aaKnown RBP7.82□□□□□ -1.16
CCNC-208ENST00000519617 EVX2Q03828 476 aa7.79□□□□□ -1.16
CCNC-208ENST00000519617 PABPN1Q86U42 306 aaKnown RBP eCLIP7.78□□□□□ -1.16
CCNC-208ENST00000519617 C19orf67A6NJJ6 358 aa7.74□□□□□ -1.17
CCNC-208ENST00000519617 PRR29P0C7W0 189 aa7.73□□□□□ -1.17
CCNC-208ENST00000519617 EHMT2Q96KQ7 1210 aa7.72□□□□□ -1.17
CCNC-208ENST00000519617 CHADLQ6NUI6 762 aa7.71□□□□□ -1.18
CCNC-208ENST00000519617 GABBR2O75899 941 aa7.63□□□□□ -1.19
CCNC-208ENST00000519617 FARP1Q9Y4F1 1045 aaPredicted RBP7.61□□□□□ -1.19
CCNC-208ENST00000519617 SPDYE4A6NLX3 237 aa7.59□□□□□ -1.19
CCNC-208ENST00000519617 STAG3Q9UJ98 1225 aa7.59□□□□□ -1.19
CCNC-208ENST00000519617 CD44P16070 742 aaKnown RBP7.57□□□□□ -1.2
CCNC-208ENST00000519617 CREBZFQ9NS37 354 aa7.54□□□□□ -1.2
CCNC-208ENST00000519617 CLCN6P51797 869 aa7.53□□□□□ -1.2
CCNC-208ENST00000519617 POTEIP0CG38 1075 aa7.47□□□□□ -1.21
CCNC-208ENST00000519617 ZNF579Q8NAF0 562 aaKnown RBP7.46□□□□□ -1.22
CCNC-208ENST00000519617 LHX8Q68G74 356 aa7.45□□□□□ -1.22
CCNC-208ENST00000519617 ZRANB1Q9UGI0 708 aa7.45□□□□□ -1.22
CCNC-208ENST00000519617 PROM2Q8N271 834 aa7.43□□□□□ -1.22
CCNC-208ENST00000519617 MNX1P50219 401 aaPredicted RBP7.42□□□□□ -1.22
CCNC-208ENST00000519617 NPM1P06748 294 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCNC-208ENST00000519617 DCBLD2Q96PD2 775 aa7.39□□□□□ -1.23
CCNC-208ENST00000519617 PLSCR2Q9NRY7 297 aa7.39□□□□□ -1.23
CCNC-208ENST00000519617 PAK3O75914 559 aaPredicted RBP7.38□□□□□ -1.23
CCNC-208ENST00000519617 GALR2O43603 387 aaPredicted RBP7.35□□□□□ -1.23
CCNC-208ENST00000519617 PHF12Q96QT6 1004 aa7.34□□□□□ -1.23
CCNC-208ENST00000519617 MIER1Q8N108 512 aa7.24□□□□□ -1.25
CCNC-208ENST00000519617 MS4A3Q96HJ5 214 aa7.24□□□□□ -1.25
CCNC-208ENST00000519617 TSPYL2Q9H2G4 693 aaPredicted RBP7.24□□□□□ -1.25
CCNC-208ENST00000519617 CCDC61Q9Y6R9 512 aa7.24□□□□□ -1.25
CCNC-208ENST00000519617 PLEKHG5O94827 1062 aa7.23□□□□□ -1.25
CCNC-208ENST00000519617 ASTLQ6HA08 431 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms