RNA–Protein interactions for RNA: ENST00000587743.1

SNHG16-205, Transcript of small nucleolar RNA host gene 16, humanhuman

Gene SNHG16, Length 2,665 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-205ENST00000587743 NISCHQ9Y2I1 1504 aa31.98■■■□□ 2.71
SNHG16-205ENST00000587743 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
SNHG16-205ENST00000587743 SUPT5HO00267 1087 aaKnown RBP27.4■■□□□ 1.98
SNHG16-205ENST00000587743 ZCCHC6Q5VYS8 1495 aaKnown RBP27.1■■□□□ 1.93
SNHG16-205ENST00000587743 CCDC180Q9P1Z9 1646 aa26.89■■□□□ 1.9
SNHG16-205ENST00000587743 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
SNHG16-205ENST00000587743 MYO15BQ96JP2 1530 aa26.71■■□□□ 1.87
SNHG16-205ENST00000587743 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
SNHG16-205ENST00000587743 HRCP23327 699 aa26.37■■□□□ 1.81
SNHG16-205ENST00000587743 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
SNHG16-205ENST00000587743 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
SNHG16-205ENST00000587743 LOC105371045A0A1W2PR82 267 aa26.03■■□□□ 1.76
SNHG16-205ENST00000587743 PPARGC1BQ86YN6 1023 aaKnown RBP25.97■■□□□ 1.75
SNHG16-205ENST00000587743 ABCC9O60706 1549 aa25.63■■□□□ 1.69
SNHG16-205ENST00000587743 TRIM26Q12899 539 aaPredicted RBP25.54■■□□□ 1.68
SNHG16-205ENST00000587743 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
SNHG16-205ENST00000587743 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
SNHG16-205ENST00000587743 TRIM41Q8WV44 630 aa25.38■■□□□ 1.65
SNHG16-205ENST00000587743 FAM9AQ8IZU1 332 aaPredicted RBP25.36■■□□□ 1.65
SNHG16-205ENST00000587743 RB1CC1Q8TDY2 1594 aa25.32■■□□□ 1.64
SNHG16-205ENST00000587743 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
SNHG16-205ENST00000587743 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
SNHG16-205ENST00000587743 ZEB1P37275 1124 aaPredicted RBP25.01■■□□□ 1.59
SNHG16-205ENST00000587743 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
SNHG16-205ENST00000587743 WIZO95785 1651 aa24.86■■□□□ 1.57
SNHG16-205ENST00000587743 NACADO15069 1562 aa24.84■■□□□ 1.57
SNHG16-205ENST00000587743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.62■■□□□ 1.53
SNHG16-205ENST00000587743 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
SNHG16-205ENST00000587743 SCAF1Q9H7N4 1312 aaKnown RBP24.58■■□□□ 1.53
SNHG16-205ENST00000587743 EIF4G1Q04637 1599 aaKnown RBP24.56■■□□□ 1.52
SNHG16-205ENST00000587743 TTBK1Q5TCY1 1321 aaPredicted RBP24.51■■□□□ 1.51
SNHG16-205ENST00000587743 CCER1Q8TC90 406 aaPredicted RBP24.5■■□□□ 1.51
SNHG16-205ENST00000587743 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
SNHG16-205ENST00000587743 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
SNHG16-205ENST00000587743 TOP2AP11388 1531 aaKnown RBP24.36■■□□□ 1.49
SNHG16-205ENST00000587743 SOGA1O94964 1423 aa24.32■■□□□ 1.48
SNHG16-205ENST00000587743 SMARCA4P51532 1647 aa24.29■■□□□ 1.48
SNHG16-205ENST00000587743 CEP162Q5TB80 1403 aa24.29■■□□□ 1.48
SNHG16-205ENST00000587743 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
SNHG16-205ENST00000587743 WRNQ14191 1432 aaPredicted RBP eCLIP24.24■■□□□ 1.47
SNHG16-205ENST00000587743 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
SNHG16-205ENST00000587743 NEUROD1Q13562 356 aa24.19■■□□□ 1.46
SNHG16-205ENST00000587743 DIEXFQ68CQ4 756 aaKnown RBP24.18■■□□□ 1.46
SNHG16-205ENST00000587743 UBTFP17480 764 aaKnown RBP24.17■■□□□ 1.46
SNHG16-205ENST00000587743 PELP1Q8IZL8 1130 aaKnown RBP24.17■■□□□ 1.46
SNHG16-205ENST00000587743 ACIN1Q9UKV3 1341 aaKnown RBP24.16■■□□□ 1.46
SNHG16-205ENST00000587743 TNIKQ9UKE5 1360 aa24.15■■□□□ 1.46
SNHG16-205ENST00000587743 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
SNHG16-205ENST00000587743 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
SNHG16-205ENST00000587743 PABPN1Q86U42 306 aaKnown RBP eCLIP24.03■■□□□ 1.44
SNHG16-205ENST00000587743 EEA1Q15075 1411 aa24.01■■□□□ 1.43
SNHG16-205ENST00000587743 GOLGA3Q08378 1498 aa23.97■■□□□ 1.43
SNHG16-205ENST00000587743 GTF3C3Q9Y5Q9 886 aa23.96■■□□□ 1.43
SNHG16-205ENST00000587743 CENPBP07199 599 aaPredicted RBP23.91■■□□□ 1.42
SNHG16-205ENST00000587743 HNRNPUL2Q1KMD3 747 aaKnown RBP23.88■■□□□ 1.41
SNHG16-205ENST00000587743 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
SNHG16-205ENST00000587743 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
SNHG16-205ENST00000587743 BICRAQ9NZM4 1560 aa23.81■■□□□ 1.4
SNHG16-205ENST00000587743 RANGAP1P46060 587 aaPredicted RBP23.79■■□□□ 1.4
SNHG16-205ENST00000587743 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
SNHG16-205ENST00000587743 CLIP1P30622 1438 aa23.77■■□□□ 1.4
SNHG16-205ENST00000587743 YTHDC1Q96MU7 727 aaKnown RBP23.77■■□□□ 1.39
SNHG16-205ENST00000587743 KIF21BO75037 1637 aa23.71■■□□□ 1.39
SNHG16-205ENST00000587743 PEG3Q9GZU2 1588 aa23.71■■□□□ 1.39
SNHG16-205ENST00000587743 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
SNHG16-205ENST00000587743 MIER1Q8N108 512 aa23.67■■□□□ 1.38
SNHG16-205ENST00000587743 VPS8Q8N3P4 1428 aa23.66■■□□□ 1.38
SNHG16-205ENST00000587743 APLP2Q06481 763 aa23.63■■□□□ 1.37
SNHG16-205ENST00000587743 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
SNHG16-205ENST00000587743 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.37
SNHG16-205ENST00000587743 TOP2BQ02880 1626 aa23.42■■□□□ 1.34
SNHG16-205ENST00000587743 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
SNHG16-205ENST00000587743 ARAP1Q96P48 1450 aa23.34■■□□□ 1.33
SNHG16-205ENST00000587743 DHX57Q6P158 1386 aaKnown RBP23.33■■□□□ 1.33
SNHG16-205ENST00000587743 PRXQ9BXM0 1461 aa23.31■■□□□ 1.32
SNHG16-205ENST00000587743 BIVM-ERCC5R4GMW8 1640 aa23.29■■□□□ 1.32
SNHG16-205ENST00000587743 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
SNHG16-205ENST00000587743 CLSPNQ9HAW4 1339 aa23.2■■□□□ 1.3
SNHG16-205ENST00000587743 CUX1P39880 1505 aa23.2■■□□□ 1.3
SNHG16-205ENST00000587743 ITGAEP38570 1179 aa23.18■■□□□ 1.3
SNHG16-205ENST00000587743 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
SNHG16-205ENST00000587743 RRBP1Q9P2E9 1410 aaKnown RBP23.14■■□□□ 1.29
SNHG16-205ENST00000587743 ARHGAP35Q9NRY4 1499 aa23.09■■□□□ 1.29
SNHG16-205ENST00000587743 CCNB3Q8WWL7 1395 aa23.08■■□□□ 1.28
SNHG16-205ENST00000587743 NCAPD3P42695 1498 aa23.04■■□□□ 1.28
SNHG16-205ENST00000587743 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
SNHG16-205ENST00000587743 CUX2O14529 1486 aa22.99■■□□□ 1.27
SNHG16-205ENST00000587743 CFTRP13569 1480 aa22.98■■□□□ 1.27
SNHG16-205ENST00000587743 SUPT16HQ9Y5B9 1047 aaKnown RBP22.98■■□□□ 1.27
SNHG16-205ENST00000587743 RAB3GAP2Q9H2M9 1393 aa22.96■■□□□ 1.27
SNHG16-205ENST00000587743 KCNH8Q96L42 1107 aa22.93■■□□□ 1.26
SNHG16-205ENST00000587743 MYT1Q01538 1121 aa22.93■■□□□ 1.26
SNHG16-205ENST00000587743 IGF1RP08069 1367 aa22.9■■□□□ 1.26
SNHG16-205ENST00000587743 MAPKBP1O60336 1514 aa22.89■■□□□ 1.25
SNHG16-205ENST00000587743 TIAM1Q13009 1591 aa22.85■■□□□ 1.25
SNHG16-205ENST00000587743 P3H3Q8IVL6 736 aa22.83■■□□□ 1.24
SNHG16-205ENST00000587743 SIN3AQ96ST3 1273 aa22.83■■□□□ 1.24
SNHG16-205ENST00000587743 PHLDB1Q86UU1 1377 aa22.82■■□□□ 1.24
SNHG16-205ENST00000587743 FAM50AQ14320 339 aaKnown RBP22.82■■□□□ 1.24
SNHG16-205ENST00000587743 CARMIL1Q5VZK9 1371 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms