RNA–Protein interactions for RNA: ENST00000541573.5

SOD2-213, Transcript of superoxide dismutase 2, humanhuman

TSL 4

Gene SOD2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-213ENST00000541573 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
SOD2-213ENST00000541573 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
SOD2-213ENST00000541573 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
SOD2-213ENST00000541573 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
SOD2-213ENST00000541573 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
SOD2-213ENST00000541573 ADRA2BP18089 450 aa17.6■□□□□ 0.41
SOD2-213ENST00000541573 FOXD1Q16676 465 aa17.53■□□□□ 0.4
SOD2-213ENST00000541573 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
SOD2-213ENST00000541573 KCNA4P22459 653 aa17.07■□□□□ 0.32
SOD2-213ENST00000541573 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
SOD2-213ENST00000541573 PIAS4Q8N2W9 510 aaPredicted RBP16.67■□□□□ 0.26
SOD2-213ENST00000541573 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
SOD2-213ENST00000541573 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
SOD2-213ENST00000541573 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
SOD2-213ENST00000541573 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
SOD2-213ENST00000541573 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
SOD2-213ENST00000541573 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
SOD2-213ENST00000541573 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
SOD2-213ENST00000541573 MSH5O43196 834 aa15.77■□□□□ 0.12
SOD2-213ENST00000541573 ZBTB22O15209 634 aa15.74■□□□□ 0.11
SOD2-213ENST00000541573 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
SOD2-213ENST00000541573 FOXD4L1Q9NU39 408 aa15.43■□□□□ 0.06
SOD2-213ENST00000541573 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
SOD2-213ENST00000541573 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
SOD2-213ENST00000541573 DMRT2Q9Y5R5 561 aa15.21■□□□□ 0.03
SOD2-213ENST00000541573 HOXD11P31277 338 aaPredicted RBP15.17■□□□□ 0.02
SOD2-213ENST00000541573 SLC4A2P04920 1241 aa15.08■□□□□ 0
SOD2-213ENST00000541573 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
SOD2-213ENST00000541573 ATXN8OSP0DMR3 200 aa14.77□□□□□ -0.05
SOD2-213ENST00000541573 FKBP8Q14318 412 aa14.62□□□□□ -0.07
SOD2-213ENST00000541573 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
SOD2-213ENST00000541573 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
SOD2-213ENST00000541573 AMER1Q5JTC6 1135 aaPredicted RBP14.52□□□□□ -0.09
SOD2-213ENST00000541573 ATF5Q9Y2D1 282 aaPredicted RBP14.51□□□□□ -0.09
SOD2-213ENST00000541573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.5□□□□□ -0.09
SOD2-213ENST00000541573 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
SOD2-213ENST00000541573 SLC24A1O60721 1099 aa14.33□□□□□ -0.12
SOD2-213ENST00000541573 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
SOD2-213ENST00000541573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
SOD2-213ENST00000541573 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
SOD2-213ENST00000541573 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
SOD2-213ENST00000541573 APLP2Q06481 763 aa13.96□□□□□ -0.17
SOD2-213ENST00000541573 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
SOD2-213ENST00000541573 MKRN4PQ13434 485 aaPredicted RBP13.88□□□□□ -0.19
SOD2-213ENST00000541573 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
SOD2-213ENST00000541573 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
SOD2-213ENST00000541573 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
SOD2-213ENST00000541573 POLA2Q14181 598 aa13.73□□□□□ -0.21
SOD2-213ENST00000541573 FBLN2P98095 1184 aa13.72□□□□□ -0.21
SOD2-213ENST00000541573 PROM2Q8N271 834 aa13.71□□□□□ -0.21
SOD2-213ENST00000541573 CAPN15O75808 1086 aa13.65□□□□□ -0.22
SOD2-213ENST00000541573 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
SOD2-213ENST00000541573 RNF39Q9H2S5 420 aa13.63□□□□□ -0.23
SOD2-213ENST00000541573 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
SOD2-213ENST00000541573 ABCB7O75027 752 aa13.5□□□□□ -0.25
SOD2-213ENST00000541573 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
SOD2-213ENST00000541573 PLCB2Q00722 1185 aa13.43□□□□□ -0.26
SOD2-213ENST00000541573 DCAF8L2P0C7V8 631 aa13.42□□□□□ -0.26
SOD2-213ENST00000541573 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
SOD2-213ENST00000541573 PKD2Q13563 968 aa13.39□□□□□ -0.27
SOD2-213ENST00000541573 ZNF692Q9BU19 519 aaPredicted RBP13.29□□□□□ -0.28
SOD2-213ENST00000541573 HAP1P54257 671 aaPredicted RBP13.28□□□□□ -0.28
SOD2-213ENST00000541573 KLHL34Q8N239 644 aa13.28□□□□□ -0.28
SOD2-213ENST00000541573 DSG3P32926 999 aa13.25□□□□□ -0.29
SOD2-213ENST00000541573 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
SOD2-213ENST00000541573 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
SOD2-213ENST00000541573 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
SOD2-213ENST00000541573 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
SOD2-213ENST00000541573 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
SOD2-213ENST00000541573 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
SOD2-213ENST00000541573 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
SOD2-213ENST00000541573 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
SOD2-213ENST00000541573 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
SOD2-213ENST00000541573 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
SOD2-213ENST00000541573 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
SOD2-213ENST00000541573 MIER1Q8N108 512 aa13.11□□□□□ -0.31
SOD2-213ENST00000541573 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
SOD2-213ENST00000541573 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
SOD2-213ENST00000541573 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
SOD2-213ENST00000541573 RGL2O15211 777 aa13.03□□□□□ -0.32
SOD2-213ENST00000541573 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.03□□□□□ -0.32
SOD2-213ENST00000541573 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
SOD2-213ENST00000541573 CFAP44Q96MT7 982 aa12.98□□□□□ -0.33
SOD2-213ENST00000541573 BCANQ96GW7 911 aa12.97□□□□□ -0.33
SOD2-213ENST00000541573 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
SOD2-213ENST00000541573 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
SOD2-213ENST00000541573 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
SOD2-213ENST00000541573 PRKCSHP14314 528 aaPredicted RBP12.88□□□□□ -0.35
SOD2-213ENST00000541573 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
SOD2-213ENST00000541573 ZBTB47Q9UFB7 747 aaPredicted RBP12.86□□□□□ -0.35
SOD2-213ENST00000541573 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
SOD2-213ENST00000541573 TSHZ2Q9NRE2 1034 aa12.82□□□□□ -0.36
SOD2-213ENST00000541573 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
SOD2-213ENST00000541573 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
SOD2-213ENST00000541573 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
SOD2-213ENST00000541573 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
SOD2-213ENST00000541573 NUBP1P53384 320 aa12.68□□□□□ -0.38
SOD2-213ENST00000541573 GSE1Q14687 1217 aa12.68□□□□□ -0.38
SOD2-213ENST00000541573 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
SOD2-213ENST00000541573 TPRNQ4KMQ1 711 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms