Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
KLHL41O60662 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.27■□□□□ 0.68
KLHL41O60662 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.27■□□□□ 0.68
KLHL41O60662 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.27■□□□□ 0.68
KLHL41O60662 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.27■□□□□ 0.68
KLHL41O60662 AC083880.1-201ENST00000608266 535 ntBASIC19.27■□□□□ 0.68
KLHL41O60662 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.27■□□□□ 0.68
KLHL41O60662 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KLHL41O60662 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
KLHL41O60662 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
KLHL41O60662 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KLHL41O60662 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KLHL41O60662 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL41O60662 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KLHL41O60662 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL41O60662 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL41O60662 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.26■□□□□ 0.67
KLHL41O60662 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
KLHL41O60662 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL41O60662 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL41O60662 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
KLHL41O60662 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
KLHL41O60662 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KLHL41O60662 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL41O60662 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.26■□□□□ 0.67
KLHL41O60662 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.26■□□□□ 0.67
KLHL41O60662 ESRRAP1-201ENST00000400596 1257 ntBASIC19.26■□□□□ 0.67
KLHL41O60662 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
KLHL41O60662 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.26■□□□□ 0.67
KLHL41O60662 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.26■□□□□ 0.67
KLHL41O60662 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.26■□□□□ 0.67
KLHL41O60662 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.26■□□□□ 0.67
KLHL41O60662 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.26■□□□□ 0.67
KLHL41O60662 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
KLHL41O60662 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL41O60662 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.26■□□□□ 0.67
KLHL41O60662 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL41O60662 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.25■□□□□ 0.67
KLHL41O60662 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.25■□□□□ 0.67
KLHL41O60662 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
KLHL41O60662 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
KLHL41O60662 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.25■□□□□ 0.67
KLHL41O60662 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
KLHL41O60662 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.25■□□□□ 0.67
KLHL41O60662 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
KLHL41O60662 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.25■□□□□ 0.67
KLHL41O60662 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 PGM5P4-201ENST00000421970 445 ntBASIC19.25■□□□□ 0.67
KLHL41O60662 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
KLHL41O60662 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KLHL41O60662 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.25■□□□□ 0.67
KLHL41O60662 AC087633.2-202ENST00000565166 1439 ntBASIC19.25■□□□□ 0.67
KLHL41O60662 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KLHL41O60662 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
KLHL41O60662 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.25■□□□□ 0.67
KLHL41O60662 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
KLHL41O60662 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.24■□□□□ 0.67
KLHL41O60662 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.24■□□□□ 0.67
KLHL41O60662 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KLHL41O60662 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KLHL41O60662 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms