Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 PRELID1P1-202ENST00000567272 903 ntBASIC20.56■□□□□ 0.88
TRANK1O15050 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRANK1O15050 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRANK1O15050 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.55■□□□□ 0.88
TRANK1O15050 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRANK1O15050 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRANK1O15050 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.55■□□□□ 0.88
TRANK1O15050 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRANK1O15050 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRANK1O15050 AC092597.1-201ENST00000487352 616 ntBASIC20.55■□□□□ 0.88
TRANK1O15050 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.55■□□□□ 0.88
TRANK1O15050 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.55■□□□□ 0.88
TRANK1O15050 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRANK1O15050 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRANK1O15050 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRANK1O15050 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.55■□□□□ 0.88
TRANK1O15050 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRANK1O15050 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.55■□□□□ 0.88
TRANK1O15050 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRANK1O15050 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRANK1O15050 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRANK1O15050 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.55■□□□□ 0.88
TRANK1O15050 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.54■□□□□ 0.88
TRANK1O15050 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRANK1O15050 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRANK1O15050 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.54■□□□□ 0.88
TRANK1O15050 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.54■□□□□ 0.88
TRANK1O15050 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.54■□□□□ 0.88
TRANK1O15050 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 FEM1AP4-201ENST00000443167 1987 ntBASIC20.54■□□□□ 0.88
TRANK1O15050 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRANK1O15050 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.54■□□□□ 0.88
TRANK1O15050 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.54■□□□□ 0.88
TRANK1O15050 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRANK1O15050 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRANK1O15050 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRANK1O15050 BX119927.1-201ENST00000636596 1552 ntBASIC20.53■□□□□ 0.88
TRANK1O15050 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRANK1O15050 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.53■□□□□ 0.88
TRANK1O15050 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.53■□□□□ 0.88
TRANK1O15050 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.53■□□□□ 0.88
TRANK1O15050 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRANK1O15050 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.53■□□□□ 0.88
TRANK1O15050 AC092329.2-201ENST00000598402 547 ntBASIC20.53■□□□□ 0.88
TRANK1O15050 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRANK1O15050 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRANK1O15050 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRANK1O15050 AP000593.1-201ENST00000393668 712 ntBASIC20.53■□□□□ 0.88
TRANK1O15050 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
TRANK1O15050 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.53■□□□□ 0.88
TRANK1O15050 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.53■□□□□ 0.88
TRANK1O15050 AC012615.1-201ENST00000565797 1299 ntBASIC20.53■□□□□ 0.88
TRANK1O15050 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
TRANK1O15050 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRANK1O15050 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRANK1O15050 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.52■□□□□ 0.88
TRANK1O15050 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRANK1O15050 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRANK1O15050 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRANK1O15050 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.52■□□□□ 0.88
TRANK1O15050 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRANK1O15050 AP002383.4-201ENST00000442518 975 ntBASIC20.52■□□□□ 0.88
TRANK1O15050 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.52■□□□□ 0.88
TRANK1O15050 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRANK1O15050 AP002469.2-201ENST00000531724 424 ntBASIC20.52■□□□□ 0.88
TRANK1O15050 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
TRANK1O15050 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRANK1O15050 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRANK1O15050 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
TRANK1O15050 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRANK1O15050 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRANK1O15050 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
TRANK1O15050 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRANK1O15050 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.51■□□□□ 0.87
TRANK1O15050 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRANK1O15050 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRANK1O15050 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
TRANK1O15050 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.51■□□□□ 0.87
TRANK1O15050 AC016734.2-201ENST00000624325 1377 ntBASIC20.51■□□□□ 0.87
TRANK1O15050 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.51■□□□□ 0.87
TRANK1O15050 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.51■□□□□ 0.87
TRANK1O15050 SMG8-203ENST00000578922 2178 ntBASIC20.51■□□□□ 0.87
TRANK1O15050 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms