Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.89■□□□□ 0.61
UBFD1O14562 AC083906.2-201ENST00000511578 360 ntBASIC18.89■□□□□ 0.61
UBFD1O14562 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
UBFD1O14562 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
UBFD1O14562 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.89■□□□□ 0.61
UBFD1O14562 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.89■□□□□ 0.61
UBFD1O14562 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.89■□□□□ 0.61
UBFD1O14562 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
UBFD1O14562 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
UBFD1O14562 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBFD1O14562 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBFD1O14562 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBFD1O14562 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBFD1O14562 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBFD1O14562 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBFD1O14562 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBFD1O14562 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.88■□□□□ 0.61
UBFD1O14562 GUSBP6-202ENST00000438529 1198 ntBASIC18.88■□□□□ 0.61
UBFD1O14562 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.88■□□□□ 0.61
UBFD1O14562 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
UBFD1O14562 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.88■□□□□ 0.61
UBFD1O14562 AC092118.2-201ENST00000613495 667 ntBASIC18.88■□□□□ 0.61
UBFD1O14562 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
UBFD1O14562 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBFD1O14562 SDHAP1-207ENST00000440850 2000 ntBASIC18.88■□□□□ 0.61
UBFD1O14562 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.88■□□□□ 0.61
UBFD1O14562 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBFD1O14562 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBFD1O14562 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBFD1O14562 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBFD1O14562 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBFD1O14562 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBFD1O14562 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBFD1O14562 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBFD1O14562 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.87■□□□□ 0.61
UBFD1O14562 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBFD1O14562 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.87■□□□□ 0.61
UBFD1O14562 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.87■□□□□ 0.61
UBFD1O14562 RPS2P52-201ENST00000469610 820 ntBASIC18.87■□□□□ 0.61
UBFD1O14562 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
UBFD1O14562 AC091874.3-201ENST00000512672 1195 ntBASIC18.87■□□□□ 0.61
UBFD1O14562 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.87■□□□□ 0.61
UBFD1O14562 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBFD1O14562 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.86■□□□□ 0.61
UBFD1O14562 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 AL121832.2-201ENST00000610979 668 ntBASIC18.86■□□□□ 0.61
UBFD1O14562 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBFD1O14562 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.86■□□□□ 0.61
UBFD1O14562 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 AC104417.2-201ENST00000562989 1793 ntBASIC18.86■□□□□ 0.61
UBFD1O14562 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBFD1O14562 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.85■□□□□ 0.61
UBFD1O14562 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
UBFD1O14562 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.85■□□□□ 0.61
UBFD1O14562 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
UBFD1O14562 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBFD1O14562 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.85■□□□□ 0.61
UBFD1O14562 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBFD1O14562 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBFD1O14562 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBFD1O14562 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.85■□□□□ 0.61
UBFD1O14562 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.85■□□□□ 0.61
UBFD1O14562 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.85■□□□□ 0.61
UBFD1O14562 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBFD1O14562 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms