Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.36■□□□□ 0.53
CLDN4O14493 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLDN4O14493 HTR7P1-201ENST00000538670 1336 ntBASIC18.36■□□□□ 0.53
CLDN4O14493 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN4O14493 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.36■□□□□ 0.53
CLDN4O14493 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN4O14493 AP001412.1-201ENST00000608405 714 ntBASIC18.36■□□□□ 0.53
CLDN4O14493 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CLDN4O14493 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN4O14493 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN4O14493 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CLDN4O14493 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CLDN4O14493 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 AP002982.1-201ENST00000492365 877 ntBASIC18.35■□□□□ 0.53
CLDN4O14493 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN4O14493 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLDN4O14493 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN4O14493 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN4O14493 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CLDN4O14493 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN4O14493 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLDN4O14493 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLDN4O14493 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
CLDN4O14493 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN4O14493 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.34■□□□□ 0.53
CLDN4O14493 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.34■□□□□ 0.53
CLDN4O14493 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN4O14493 C1QL1P1-201ENST00000568105 661 ntBASIC18.34■□□□□ 0.53
CLDN4O14493 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLDN4O14493 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN4O14493 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN4O14493 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN4O14493 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN4O14493 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN4O14493 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN4O14493 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN4O14493 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN4O14493 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN4O14493 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CLDN4O14493 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN4O14493 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN4O14493 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN4O14493 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN4O14493 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.33■□□□□ 0.53
CLDN4O14493 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.33■□□□□ 0.53
CLDN4O14493 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN4O14493 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN4O14493 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN4O14493 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
CLDN4O14493 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN4O14493 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN4O14493 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLDN4O14493 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN4O14493 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN4O14493 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN4O14493 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN4O14493 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN4O14493 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN4O14493 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN4O14493 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN4O14493 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN4O14493 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN4O14493 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN4O14493 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms