Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF9BB2RNN3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF9BB2RNN3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF9BB2RNN3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF9BB2RNN3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF9BB2RNN3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
C1QTNF9BB2RNN3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
C1QTNF9BB2RNN3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1QTNF9BB2RNN3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF9BB2RNN3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AC092597.1-201ENST00000487352 616 ntBASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 Z85996.1-201ENST00000494644 937 ntBASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 TFP1-202ENST00000475455 1573 ntBASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.32■□□□□ 0.52
C1QTNF9BB2RNN3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 RASA4DP-201ENST00000460726 1199 ntBASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 FOSL1P1-201ENST00000511041 816 ntBASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C1QTNF9BB2RNN3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 AC116351.2-201ENST00000606540 1585 ntBASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 TSPY12P-201ENST00000421279 868 ntBASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 KRT18P31-201ENST00000506277 1292 ntBASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.3■□□□□ 0.52
C1QTNF9BB2RNN3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms