Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LRRC53A6NM62 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 GUSBP6-202ENST00000438529 1198 ntBASIC20.97■□□□□ 0.95
LRRC53A6NM62 AC006970.2-201ENST00000450065 779 ntBASIC20.97■□□□□ 0.95
LRRC53A6NM62 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.97■□□□□ 0.95
LRRC53A6NM62 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LRRC53A6NM62 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRC53A6NM62 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRC53A6NM62 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LRRC53A6NM62 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC53A6NM62 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.96■□□□□ 0.95
LRRC53A6NM62 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 RPS2P52-201ENST00000469610 820 ntBASIC20.96■□□□□ 0.95
LRRC53A6NM62 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.96■□□□□ 0.95
LRRC53A6NM62 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LRRC53A6NM62 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.96■□□□□ 0.95
LRRC53A6NM62 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
LRRC53A6NM62 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC53A6NM62 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LRRC53A6NM62 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LRRC53A6NM62 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.95■□□□□ 0.95
LRRC53A6NM62 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.95■□□□□ 0.94
LRRC53A6NM62 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC53A6NM62 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
LRRC53A6NM62 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 CROCCP3-202ENST00000420820 1947 ntBASIC20.94■□□□□ 0.94
LRRC53A6NM62 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
LRRC53A6NM62 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC53A6NM62 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms