Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 TPSP2-201ENST00000561760 610 ntBASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 AC012615.1-201ENST00000565797 1299 ntBASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TMEM88BA6NKF7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 PHGDH-210ENST00000641115 1638 ntBASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 TSPY12P-201ENST00000421279 868 ntBASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TMEM88BA6NKF7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 TMEM179-206ENST00000616017 1645 ntBASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 AC242852.2-201ENST00000615738 1807 ntBASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 HMGN1P19-201ENST00000436976 333 ntBASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 KRT16P4-201ENST00000453883 522 ntBASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 AL162741.1-201ENST00000565563 1558 ntBASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 AC093525.10-201ENST00000625130 1569 ntBASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
TMEM88BA6NKF7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
TMEM88BA6NKF7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
TMEM88BA6NKF7 C9orf163-202ENST00000624034 2573 ntBASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TMEM88BA6NKF7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.69■■□□□ 1.22
TMEM88BA6NKF7 AC121338.2-201ENST00000622535 1744 ntBASIC22.69■■□□□ 1.22
TMEM88BA6NKF7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.69■■□□□ 1.22
TMEM88BA6NKF7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TMEM88BA6NKF7 IL9RP2-201ENST00000423948 1312 ntBASIC22.69■■□□□ 1.22
TMEM88BA6NKF7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
TMEM88BA6NKF7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22.69■■□□□ 1.22
TMEM88BA6NKF7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.69■■□□□ 1.22
TMEM88BA6NKF7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TMEM88BA6NKF7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TMEM88BA6NKF7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 KRT18P58-201ENST00000527480 1120 ntBASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms