Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TVP23AA6NH52 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TVP23AA6NH52 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TVP23AA6NH52 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TVP23AA6NH52 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.36■□□□□ 0.37
TVP23AA6NH52 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 DUSP5P2-201ENST00000426873 1033 ntBASIC17.36■□□□□ 0.37
TVP23AA6NH52 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.36■□□□□ 0.37
TVP23AA6NH52 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.36■□□□□ 0.37
TVP23AA6NH52 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.36■□□□□ 0.37
TVP23AA6NH52 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.36■□□□□ 0.37
TVP23AA6NH52 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.36■□□□□ 0.37
TVP23AA6NH52 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.36■□□□□ 0.37
TVP23AA6NH52 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TVP23AA6NH52 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TVP23AA6NH52 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TVP23AA6NH52 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TVP23AA6NH52 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 AC006970.2-201ENST00000450065 779 ntBASIC17.35■□□□□ 0.37
TVP23AA6NH52 AC083906.2-201ENST00000511578 360 ntBASIC17.35■□□□□ 0.37
TVP23AA6NH52 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 AC006557.6-201ENST00000623071 864 ntBASIC17.35■□□□□ 0.37
TVP23AA6NH52 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TVP23AA6NH52 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TVP23AA6NH52 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TVP23AA6NH52 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TVP23AA6NH52 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.34■□□□□ 0.37
TVP23AA6NH52 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.34■□□□□ 0.37
TVP23AA6NH52 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.34■□□□□ 0.37
TVP23AA6NH52 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.34■□□□□ 0.37
TVP23AA6NH52 TFP1-202ENST00000475455 1573 ntBASIC17.34■□□□□ 0.37
TVP23AA6NH52 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.34■□□□□ 0.37
TVP23AA6NH52 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TVP23AA6NH52 AL121832.2-201ENST00000610979 668 ntBASIC17.34■□□□□ 0.37
TVP23AA6NH52 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.34■□□□□ 0.37
TVP23AA6NH52 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TVP23AA6NH52 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 AC124283.5-201ENST00000624661 1809 ntBASIC17.34■□□□□ 0.37
TVP23AA6NH52 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TVP23AA6NH52 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.34■□□□□ 0.37
TVP23AA6NH52 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.33■□□□□ 0.37
TVP23AA6NH52 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TVP23AA6NH52 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
TVP23AA6NH52 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TVP23AA6NH52 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TVP23AA6NH52 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.33■□□□□ 0.37
TVP23AA6NH52 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms