Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 SLC7A5P1-201ENST00000568957 537 ntBASIC13.76□□□□□ -0.21
LINC01546A6NGU7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 LINC00896-202ENST00000609602 2128 ntBASIC13.76□□□□□ -0.21
LINC01546A6NGU7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 HLA-G-202ENST00000376815 851 ntBASIC13.75□□□□□ -0.21
LINC01546A6NGU7 HLA-G-203ENST00000376818 1127 ntBASIC13.75□□□□□ -0.21
LINC01546A6NGU7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 SLC25A6P5-201ENST00000435663 894 ntBASIC13.75□□□□□ -0.21
LINC01546A6NGU7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01546A6NGU7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 AC083906.6-201ENST00000641366 219 ntBASIC13.74□□□□□ -0.21
LINC01546A6NGU7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms