Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RCCD1A6NED2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RCCD1A6NED2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RCCD1A6NED2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RCCD1A6NED2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 AC004911.1-201ENST00000416316 871 ntBASIC20.71■□□□□ 0.91
RCCD1A6NED2 AC026271.2-201ENST00000428091 497 ntBASIC20.71■□□□□ 0.91
RCCD1A6NED2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 SDHAP1-207ENST00000440850 2000 ntBASIC20.71■□□□□ 0.91
RCCD1A6NED2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.71■□□□□ 0.91
RCCD1A6NED2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RCCD1A6NED2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RCCD1A6NED2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
RCCD1A6NED2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.7■□□□□ 0.9
RCCD1A6NED2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.7■□□□□ 0.9
RCCD1A6NED2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.7■□□□□ 0.9
RCCD1A6NED2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RCCD1A6NED2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RCCD1A6NED2 AL031598.1-201ENST00000561511 1773 ntBASIC20.69■□□□□ 0.9
RCCD1A6NED2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RCCD1A6NED2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RCCD1A6NED2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.69■□□□□ 0.9
RCCD1A6NED2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.69■□□□□ 0.9
RCCD1A6NED2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RCCD1A6NED2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RCCD1A6NED2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RCCD1A6NED2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RCCD1A6NED2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.69■□□□□ 0.9
RCCD1A6NED2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RCCD1A6NED2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RCCD1A6NED2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RCCD1A6NED2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RCCD1A6NED2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
RCCD1A6NED2 AC079416.2-201ENST00000625035 1193 ntBASIC20.68■□□□□ 0.9
RCCD1A6NED2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms